DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11147 and Abca16

DIOPT Version :9

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:XP_038957107.1 Gene:Abca16 / 293444 RGDID:1563534 Length:1680 Species:Rattus norvegicus


Alignment Length:892 Identity:185/892 - (20%)
Similarity:312/892 - (34%) Gaps:291/892 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AAVEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVV 66
            |.:::::.:|.:  |:.|.|  |.|::|:..|.:..|||.:|.||||.||.:.|:.....||..:
  Rat   514 AGIQIKHLHKEF--KTKPAI--NNLSLNIYEGQVTVLLGHNGAGKTTTLSVLTGRFAATRGEAYI 574

  Fly    67 LGAKPGEPGSGVPGSRVGFMPQEIALVEEMTVKETIFYFGRIYG-------LTDERIREKFKLLK 124
            .|....:..:.: ...:||.||...|.:::|:.|.:|::..|.|       :...|:...|.|.:
  Rat   575 NGYNISDNMAEI-RKDLGFCPQHDLLFDDLTLSEHLFFYCMIKGHPQNINCVEINRMLSVFNLQE 638

  Fly   125 ELLQLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSK 189
            ....|..:      .|||.:|:||...|::...:::|||||:.|:|||.|...||.|....:|. 
  Rat   639 NYHTLSGS------VSGGVRRKLSIILALMGGSKVVILDEPSSGMDPMSRRATWDILQHYKQNR- 696

  Fly   190 LAVIITTHYIEEA------------------------KQA------------------NCIGLMR 212
             .:::||||::||                        ||.                  |.|.:::
  Rat   697 -TILLTTHYMDEADVLGDRIAIMVRGTLHCCGSSVFLKQIYGAGYHIVLEKEPYCDVDNIIAMIQ 760

  Fly   213 N---GVLLAEDTPTN---IMIKFGTQSIEDAFLILSQRQ-----GNEDELAQIMDH-----NKNQ 261
            .   |.:|..|....   |:.|......|..|..|..||     .|.......|:.     ||..
  Rat   761 QHVPGSMLENDIGNELSFILPKKYVSRFETLFTELEMRQKALGIANFGASITTMEEVFLKVNKLA 825

  Fly   262 ALPAAVLPPEVIDTHEPNMPEKQPIPFEEPLNEN-----RKKIFFTTKGRVKALMTKNF---VQL 318
            |      |...|.|.:|.....:.:..:|..|.|     .|.||    ..::.:.|..|   |.|
  Rat   826 A------PQRSIQTIQPYYLTYKKMRQDEQQNVNILRNYNKPIF----PYLREIATVKFNTGVPL 880

  Fly   319 FRQPS---------------GIIFMLLFPIIQLTCFYLA------------------IGKTPT-- 348
            :||..               .::|:.:..::.:|.:.|.                  .|||..  
  Rat   881 YRQQFYSMFIKRALFIGRNWKLMFLQIIVVLVVTTYLLLSLHLDDNDIPERELNLSHYGKTIVPY 945

  Fly   349 --------------NLEIGVYS---------GEVENY----GEC-------------FDENLVTV 373
                          ||:|.:.|         |::.||    .:|             .::.::|:
  Rat   946 SISGNSDLALNLIKNLKIFLKSKNQSLKKIKGDMNNYILENKDCRTFCIIALSIKVERNKTVLTI 1010

  Fly   374 YKDSDN-----------ESCLFNKLSCRYIRVLGDDVATRK-----YYASEADALNDAKRATTVG 422
            :.:::.           ::.||..||.|...:    .|..|     :|.|....:|.        
  Rat  1011 FFNNEAYHSPAISLSILDNILFMTLSGRDASI----TAFNKPQPLPHYGSNTVPVNG-------- 1063

  Fly   423 YLHFAQNFSDSILSVMEDGIHSSDGAVDHAELSIHID-MTDQQV-AYFMQRKLRDKFSTF----- 480
             |...|..:..|..|:  |..|.....:....:.||. :|...| .|::...|.|....|     
  Rat  1064 -LQIVQCLAFGISVVV--GSFSIQTVTERISQAKHIQFLTGVCVLTYWLSALLCDLIFFFFACCV 1125

  Fly   481 MRSVVKDCNVSTAIVD-----------------LPVQFQEPIFGSTDIEFQQYCAPGVVMTMVFF 528
            :..:.:.|.:...:|.                 :|:.:    .||  ..|....|..:.:|:..:
  Rat  1126 LLGIFRFCQLEAFVVHYNFLDTILIFMLYGWCVVPLTY----LGS--FLFNSSTAAYIKITLFNY 1184

  Fly   529 LATLMTAAVFISERMDGIWDRTLLAGVSATEMLWAHLLTQLIIMALQSFEVIMYIGLVFDTYNNG 593
            .:|:.:..::...:..|.....|:           |:|.:.|:|||.|:.:.|.|...||.|.  
  Rat  1185 FSTMFSIIIYTIVQFYGEDFPALI-----------HILIKTILMALPSYNLAMSISKYFDDYE-- 1236

  Fly   594 DTTTLIGLLTLTAFCGMLFGLFISVF--CK------------SHTEANFVATGAFYPMIILCGLL 644
                      :...|...|.   |::  |.            .|....|:.|.|...::.|. ||
  Rat  1237 ----------VKRLCAREFR---SIYMDCSEPFIQNNVYGFGEHGIGKFLITLATMGLVFLL-LL 1287

  Fly   645 WPLESMPQFLQDLVMVLPFTIPSISARNV-------IEKGWSITHEK 684
            ..|||:...|::.|.           |||       |.||....|.|
  Rat  1288 LSLESVSSSLKNFVF-----------RNVLFYFYNKIRKGRHGVHSK 1323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 1..282 CDD:224054 87/344 (25%)
P-loop_NTPase 4..222 CDD:304359 70/269 (26%)
ABC2_membrane_3 322..702 CDD:289468 86/499 (17%)
ABC2_membrane 469..664 CDD:279410 42/230 (18%)
Abca16XP_038957107.1 rim_protein <163..1664 CDD:130324 185/892 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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