DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11147 and Abca16

DIOPT Version :9

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:XP_006507746.1 Gene:Abca16 / 233810 MGIID:2388711 Length:1679 Species:Mus musculus


Alignment Length:861 Identity:178/861 - (20%)
Similarity:318/861 - (36%) Gaps:244/861 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AAVEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVV 66
            |.:.:.:.:|.:  |:.|.:  |.|::|:..|.:..|||.:|.||||.||.:.|:.....||..:
Mouse   514 AGIHIMHLHKEF--KNKPAV--NNLSLNIYEGQVTVLLGHNGAGKTTTLSVLTGRFAATRGEAYI 574

  Fly    67 LGAKPGEPGSGVPGSRVGFMPQEIALVEEMTVKETIFYFGRIYGLTD-------ERIREKFKLLK 124
            .|....:....| ...:||.||...|.:::|:.|.:|::..:.|:..       :|:...|.|.:
Mouse   575 NGYNISDNMIEV-RKDLGFCPQHDLLFDDLTLSEHLFFYCMVKGIPQNINCEEIDRMLSAFNLQE 638

  Fly   125 ELLQLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSK 189
            ....|..:      .|||.:|:||...|::...:::|||||:.|:||:.|...||.|.....|. 
Mouse   639 NYHTLSGS------ASGGVRRKLSIVLALMAGSKVVILDEPSSGMDPVSRRATWDILQHYKHNR- 696

  Fly   190 LAVIITTHYIEEAK-QANCIGLMRNGVLLAEDTPTNIMIKFGTQSIEDAFLILSQRQ---GNEDE 250
             .:::||||::||. ..:.:.:|..|.|  ....:::.:|   |.....:.|:.::|   ..::.
Mouse   697 -TILLTTHYMDEADVLGDRVAIMVRGTL--HCCGSSVFLK---QIYGAGYHIVMEKQQYCDVDNI 755

  Fly   251 LAQIMDHNKNQALPAAVLPPEVIDTHEPNMPEKQPIPFEEPLNE---NRKKIFFTTKGRVKALMT 312
            :|.|..|     :|.|||...:.:.....:|:|....||....|   .:|.:...:.|.....|.
Mouse   756 IAMIQQH-----VPGAVLENNIENELSFILPKKYVSRFETLFTELEMRQKALGIASFGASITTME 815

  Fly   313 KNFVQLFRQPSGIIFMLLFP---IIQLTCFYLAIGKTPTNLEIGVYSGEVENYGECFDENLVTVY 374
            :.||::.:        |..|   |..:..:|||..|        :...|.:|.            
Mouse   816 EVFVKVNK--------LATPQKSIQTIQPYYLAYRK--------MRQDEQQNV------------ 852

  Fly   375 KDSDNESCLFNKLSCRYIRVLGDDVATRKY------YASEADALNDAKRATTVG----------- 422
                |....::|.:..|:    .::||.|:      |..:..:| ..|||..:.           
Mouse   853 ----NMPINYSKPNFPYL----SEIATVKFNTGVPLYRQQFYSL-FIKRALFISRNWKFMLLQII 908

  Fly   423 -------YLHFAQNFSDSILSVMEDGI---------HSSDGAVDHA-----ELSIHIDMTDQQVA 466
                   ||..|.:.:::.:...|..:         :|:.|..|.|     .|:|.:...:|.: 
Mouse   909 VVMVVTTYLLLALHLNNNDIPERELNLSHYGRTIVPYSTSGNSDLALNLTKNLNIFLKSKNQNL- 972

  Fly   467 YFMQRKLRDKFSTFMRSVVKDCN-------------------------------VSTAIVDLPVQ 500
                ||:|...:.::.. .|||:                               :|.:|:| .:.
Mouse   973 ----RKIRGDMNDYILK-NKDCHTFCLVALSIKVERNKTVLTIFFNNEAYHSPAISLSILD-NIL 1031

  Fly   501 FQE-----------------PIFGS-----TDIEFQQYCAPGVVMTMVFFLATLMTAAVFISERM 543
            |..                 |.:||     ..::..|..|.|:.:.:..|  ::.|    ::||.
Mouse  1032 FMTLSGPDASITVFNKPQPLPHYGSNIVPVNGLQIVQCLAFGISVVVGSF--SIQT----VTERT 1090

  Fly   544 DGIWDRTLLAGVSATEMLWAHLLTQLIIM--------------ALQSFEVIMYIGLVFDTYNNGD 594
            ........|.||.......:.||..||..              .|::|.|         .||..|
Mouse  1091 SQAKHIQFLTGVCVHTYWLSALLCDLIFFFFACCVLLAIFKFCQLEAFVV---------HYNFLD 1146

  Fly   595 TTTLIGL-----LTLTAFCGMLFGLFISVFCKSHTEANFVATGAFYPMIILCGLLWPLESMPQFL 654
            |..:..|     :.||.....||....:.:.|. |..|:.:|  .:.:||...:.:.....|.|:
Mouse  1147 TILIFMLYGWCVVPLTYIASFLFNSSTAAYIKI-TLFNYFST--MFSIIIYTIIQFYGNDFPNFV 1208

  Fly   655 QDLVMVLPFTIPSISARNVIEKGWS----------------------ITHEKVYNGF-------- 689
            ..|:..:...:||.:....|.|.:.                      .|...|| ||        
Mouse  1209 HILIRAILMALPSYNLAMSISKYFDDYEVKRLCAREFKSIYLDCSDPYTQNNVY-GFGEHGIGKF 1272

  Fly   690 -LVMAGWTIIFFVLCL 704
             :.:|...::|.:|.|
Mouse  1273 LITLATIGLVFLLLLL 1288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 1..282 CDD:224054 76/290 (26%)
P-loop_NTPase 4..222 CDD:304359 64/225 (28%)
ABC2_membrane_3 322..702 CDD:289468 90/523 (17%)
ABC2_membrane 469..664 CDD:279410 48/266 (18%)
Abca16XP_006507746.1 rim_protein <196..1665 CDD:130324 178/861 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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