DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and Abcg4

DIOPT Version :9

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_620405.3 Gene:Abcg4 / 192663 MGIID:1890594 Length:646 Species:Mus musculus


Alignment Length:763 Identity:160/763 - (20%)
Similarity:284/763 - (37%) Gaps:245/763 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AAVEVRNGYKYYGSKSNP-------KIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRL 59
            :||::......|..:..|       |.:|..|:....|..:.|::|.||.||:|.::.:.|.|. 
Mouse    57 SAVDIEFVELSYSVREGPCWRKRGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRE- 120

  Fly    60 NG--GEVVVLGAKPGEPGSGVPGSRVGFMPQEIALVEEMTVKETIFYFGRIYGLTDERIREKFKL 122
            :|  |:::|.| :|.|..:....|  .::.|:..|:..:||.|.:.....:      ::.||.::
Mouse   121 SGMKGQILVNG-RPRELRTFRKMS--CYIMQDDMLLPHLTVLEAMMVSANL------KLSEKQEV 176

  Fly   123 LKELLQLPPARQMIKQC--------SGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWD 179
            .|||:........:..|        ||||::||:.|..::::|.::..||||.|||.....::..
Mouse   177 KKELVTEILTALGLMSCSHTRTALLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVS 241

  Fly   180 FLVETTRNSKLAVIITTH-------------YIEEAKQANCI--GLMRN------GVLLAEDT-- 221
             |:::..:....||.|.|             ||  ..|..||  |::.|      |:.|...|  
Mouse   242 -LMKSLAHGGRTVICTIHQPSAKLFEMFDKLYI--LSQGQCIFKGVVTNLIPYLKGLGLHCPTYH 303

  Fly   222 -PTNIMIKFGT-----------QSIEDAFLILSQRQGNEDELAQIMDHNKNQALPAAVLPPEVID 274
             |.:.:|:..:           :::::....:::::.:.         .||: |||         
Mouse   304 NPADFIIEVASGEYGDLNPMLFRAVQNGLCTMAEKKSSP---------GKNE-LPA--------- 349

  Fly   275 THEPNMPEKQPIPFEEPLNENRKKIFFTTKGRVKALMTKNFVQLFRQPSGIIFMLLFPIIQLTCF 339
             |.|..|     |..:|:..:.    |.|     :.:|: |..|||:    .|:.:.....||..
Mouse   350 -HCPTCP-----PELDPIESHT----FAT-----STLTQ-FCILFRR----TFLSILRDTVLTHL 394

  Fly   340 YLAIGKTPTNLEIGVYSGEVENYGECFDENLVTVYKDSDNESCLFNKLSCRYIRVLGDDVATRKY 404
                 :..:::.|||..|.:                               |:.: |||.     
Mouse   395 -----RFMSHVLIGVLIGLL-------------------------------YLHI-GDDA----- 417

  Fly   405 YASEADALNDAKRATTVGYLHFAQNFSDSILSVMEDGIHSSDGAVDHAELSIHIDMTDQQVAYFM 469
                      :|.....|:|.|      |:|.:|       ..|:....|:..::|     |.||
Mouse   418 ----------SKVFNNTGFLFF------SMLFLM-------FAALMPTVLTFPLEM-----AVFM 454

  Fly   470 QRKLRDKFSTFMRSVVKDCNVSTAIVDLPVQFQEPIFGSTDIEFQQYCAPGVVMTMVFFLATLMT 534
            :..|...::      :|...::..:.|:|              ||..| |.|..::|::    ||
Mouse   455 REHLNYWYT------LKAYYLAKTMADVP--------------FQVVC-PVVYCSIVYW----MT 494

  Fly   535 AAVFISERMDGIWDRTLLAGVSATEMLWAHLLTQLIIMALQSFEVIMYIGLVFDTYNNGDTTTLI 599
            .....:.|.      .|.:.::....|.|..|..||..|..|.:|..::|.|             
Mouse   495 GQPAETSRF------LLFSALAIATALVAQSLGLLIGAASTSLQVATFVGPV------------- 540

  Fly   600 GLLTLTAFCGMLF-GLFIS-----VFCKSHTEANFVATGAFYPMIILCGLLWPLESMPQ-FLQDL 657
                 ||...:|| |.|:|     .:.:..:..::|..|       ..||:..:..|.: .|..|
Mouse   541 -----TAIPVLLFSGFFVSFKTIPTYLQWSSYLSYVRYG-------FEGLILTIYGMERGHLTCL 593

  Fly   658 VMVLPFTIPSISARNVIEKGWSITHEKVYNGFLVMAGWTIIFFVLCLI 705
            ....||..|.|..|.:     .:...|:|..|||:.   |.|..|.|:
Mouse   594 DEQCPFRDPQIILREL-----DVEEAKLYMDFLVLG---IFFLALRLL 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 1..282 CDD:224054 74/331 (22%)
P-loop_NTPase 4..222 CDD:304359 64/258 (25%)
ABC2_membrane_3 322..702 CDD:289468 74/386 (19%)
ABC2_membrane 469..664 CDD:279410 40/201 (20%)
Abcg4NP_620405.3 3a01204 44..646 CDD:273361 160/763 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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