DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and abt-5

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_001364572.1 Gene:abt-5 / 173081 WormBaseID:WBGene00000023 Length:1582 Species:Caenorhabditis elegans


Alignment Length:895 Identity:179/895 - (20%)
Similarity:315/895 - (35%) Gaps:292/895 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAVEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVV 65
            :|.:|:....|.|   .|.:..:|.|::..:||.:..|||.:||||:|....|.|..:...|:|:
 Worm   448 IADIELSGLVKVY---QNGEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHQATEGKVM 509

  Fly    66 VLGAKPGEPGSGVPGSRVGFMPQEIALVEEMTVKETIFYFGRIYGLTDERIREKFK-----LLKE 125
            : |..............:|:.||...:.:|:||.|.:.....:.|.:.   ...||     |||:
 Worm   510 I-GGIDANANRAEARELIGYCPQYNPIYDELTVWEHLRLVNALKGRSG---GSDFKMDAESLLKQ 570

  Fly   126 LLQLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDF--LVETTRNS 188
            :........:.|..|||.:|:|....|||....:::|||||.|:||..|..:.:.  ||:..|  
 Worm   571 IELTDKRNTLAKNLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDPSARIDVQNMLALVKADR-- 633

  Fly   189 KLAVIITTHYIEEA-KQANCIGLMRNGVLLAEDTPTNIMIKFG------------------TQSI 234
              .:::||||::|| |..:.|.:|.:|.:.|..:...:..|:|                  .:|.
 Worm   634 --TILLTTHYMDEAEKLGDWIFVMSHGKMAASGSKHYLKQKYGGGMLLTLVFKSVHDPMRPRKSY 696

  Fly   235 EDAF---------LILSQRQGNEDELAQIMDHNKNQALPAAVLPPEVIDTHEPNMPEKQPIPFEE 290
            |.|:         .::...:|...|:: |::..|:: ||..:...|.:...:.|.||.|.:  |.
 Worm   697 ETAYDVCKTVCSTALVKDERGQMIEIS-ILETEKSR-LPTLLKILESVMEEDYNNPEFQAL--EP 757

  Fly   291 PLNENRKKIFFTTKG-------------------------------------------------- 305
            .:.|..:.:...|.|                                                  
 Worm   758 DIQEKCRTLELATIGVSMSSLEQVFIKIGDECDDIMNGTGVDKKTERQEKFSTLVQYKIQQPKQG 822

  Fly   306 ------RVKALMTKNFVQLFRQPSGIIFMLLFPIIQLTCF---YLAIGKTPTNLEIGVYSGEVEN 361
                  .|.||:.|....|:|.|..|...::.|::.|..|   :|.:...|..|      .::|:
 Worm   823 FSKLMMVVWALLQKRAYYLYRNPVQITLQIILPLLTLWLFAVPFLRLEPKPPKL------SDIES 881

  Fly   362 YGEC-FDENLVTVYKDSDNESCLFNKLSC----RYIRVLGDD---VATRKYYASEADALNDAKRA 418
            :... :..:.|.:..:::|:..|.|.|:.    ..::|..:|   ...:||          ::..
 Worm   882 FDPSQYPHSTVLLQLENENDDRLANYLNSFSNFEVVKVGYNDHYGYLVKKY----------SQVF 936

  Fly   419 TTVGYLHFAQNFSDSILSVMEDGIHSSDGAVDHAELSIHIDMTDQQVAYFMQ-----RKLRDKFS 478
            .|:|::.......||....:..|                    |:..|..|.     ..|||.  
 Worm   937 KTLGFIVKVNKKGDSKFYKISQG--------------------DKNAAILMNIIASAMYLRDP-- 979

  Fly   479 TFMRSVVKDCNVSTAIV---DLPVQFQEPIFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVF-- 538
                ||.|..:|::.::   |..::::.             .|...:...:|||  |:.|.:|  
 Worm   980 ----SVTKLPHVTSRVIWMNDPKIKYEG-------------LASFFLFENIFFL--LVLAGIFIQ 1025

  Fly   539 -----ISERMDGIWDRTLLAGVS-----ATEMLWAHLLTQLIIMALQSFEVIMYIGLVFDTYNNG 593
                 |.|::.....:..|.|:|     ....||..||.        :|.::..||.:..     
 Worm  1026 STVYLIEEKICKFAHQQYLTGLSTIAYWGVVFLWDFLLF--------TFFLLYTIGFLIS----- 1077

  Fly   594 DTTTLIGLL------TLTAFCGMLFGL-----FISVFCKSHTEANFVATGAFYPMIILCGLLWPL 647
                 .|:|      .:..|.|:||..     ..|....:.|..||:       :.:.|.:.|..
 Worm  1078 -----FGVLQGHIHEIVVIFYGLLFYFAPLVYLTSALINTPTRGNFL-------LYMFCCIPWLA 1130

  Fly   648 ESMPQFLQDLVMVLPFTIPSISARNVIEKGWSITHEKVYNGFLVMAG------------------ 694
            .|:...|.:...:..::       :.||.|:.|.:..:  |||  ||                  
 Worm  1131 YSIVSELHNFPPIQKYS-------DEIEYGFRIFNPSI--GFL--AGLMKIAALNYPKSGLDKHF 1184

  Fly   695 ------WTI--IFFVL-------------------------CLIGIRRKA 711
                  ||.  |||.|                         |..|.||::
 Worm  1185 EHLTNLWTYEGIFFELMFLFFGGIFLTILLGCATLKPFRRACFRGTRRRS 1234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 71/275 (26%)
ABC2_membrane_3 322..702 CDD:463674 81/447 (18%)
YadH 513..710 CDD:440604 51/270 (19%)
abt-5NP_001364572.1 ABC2_membrane_3 <158..391 CDD:463674
rim_protein <419..1569 CDD:130324 179/895 (20%)
Blue background indicates that the domain is not in the aligned region.

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