DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14006 and Nemp

DIOPT Version :10

Sequence 1:NP_608953.1 Gene:CG14006 / 33802 FlyBaseID:FBgn0031733 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_573142.1 Gene:Nemp / 32639 FlyBaseID:FBgn0030768 Length:454 Species:Drosophila melanogaster


Alignment Length:484 Identity:99/484 - (20%)
Similarity:173/484 - (35%) Gaps:136/484 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 APLLAFVILGL-------NYAASSFVNWDNVFYEQQATYLRPGEPHIQEGQTLLNMLYVNNQVQV 60
            |.||...:.|.       |.|:|            ...||.|| .:|...:.:|.:    ..::.
  Fly     4 AGLLMLTVAGYFTSGIPGNTASS------------DVAYLTPG-TYINLSENILGL----QTLRT 51

  Fly    61 YCQPPTAFSMWNVFQSNRLRLQIAAGEDYTQYKGATVREV--HHAHSQLDECHEGKPLGHSA--- 120
            :|.|....::.::|::....|.|.: :||:||.|.|..||  |:...|            |.   
  Fly    52 FCYPGKRLTVSSLFETVEFVLAIGS-DDYSQYGGKTPEEVLQHYKDKQ------------SLFSI 103

  Fly   121 ---ADEPRIVPMATYEHSCYGIYTSKPFVLTLEVISFDLERVSQFTFGIVLWLSCPLLADSLLFF 182
               |.:.:::.::.:|..|.||.:.:.:.:.|..|..||.|::||..||::..|...||.:.:|:
  Fly   104 TLFAQKRQLLQLSPFEQQCIGISSRQAYTVILNSIPLDLWRLAQFAVGILILFSARRLAKNSVFY 168

  Fly   183 YCSAAALG--AHLAGLLAVAATLMASDGERYLRLGT--------------LKVNFKLVL-NERPT 230
            |.....:|  |.|..::.:||.|..   .|.:..|.              |..|.:|:| ..|..
  Fly   169 YLVGIVIGICASLLVVIYLAAKLFP---RRTMMYGVLIGGWTIGFYVIKQLADNLRLILITYRDH 230

  Fly   231 VITLALVSG--AWLL-------KSASQRCSFLWRCTLFRRLHHRLLKGTSYLLILTASDHRG--- 283
            |:...:::|  ::|:       |:...:...:|           :|:....::...:|.|..   
  Fly   231 VLGYLVITGLISFLICYRIGPPKNPRSQTIVMW-----------VLQAIGAVMAYFSSWHTSAVI 284

  Fly   284 FGMTCLMLLMPWPELLTVIRWLKTLYACYKRG---SVKPMVQVEIENQDVPYQDSYLRIVRSEYD 345
            |.|..:.:...:|     |.|...:...|:|.   ..:.:.|.|.|.|........|..:| :|.
  Fly   285 FIMVLVFVAHYFP-----ISWTNQIKFMYRRRFPLKRRMLTQEEYEQQTAVETSKSLADLR-KYV 343

  Fly   346 NR-----------------------------SSESSGFSRSFSQNKHNMGFYREQEDQDNALIYE 381
            |.                             ..|....||:..:   :|....|:|..:..   |
  Fly   344 NSPECKQWAVMGKLRDPLRFASFANGAPHLDDEEIEDHSRTIEE---SMDAAPEEESVEEP---E 402

  Fly   382 SRRPTE----RNCFNRCHQCTPTRSPRPE 406
            ..:|.|    .|...|..|......|.||
  Fly   403 EDKPAELLPLPNSQFRYQQAARNSEPEPE 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14006NP_608953.1 NEMP 147..>185 CDD:463008 14/37 (38%)
NempNP_573142.1 NEMP 132..375 CDD:463008 50/262 (19%)

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