DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11149 and Large2

DIOPT Version :9

Sequence 1:NP_608952.2 Gene:CG11149 / 33800 FlyBaseID:FBgn0031732 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_006234624.1 Gene:Large2 / 311202 RGDID:735214 Length:715 Species:Rattus norvegicus


Alignment Length:552 Identity:111/552 - (20%)
Similarity:182/552 - (32%) Gaps:194/552 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RLWPVLIL-FNVALLLVWRN------LQQAQKLAASSNTGGQKSVGLLLSNESNPSRFSANFHLA 70
            |.||.|.. ||..::|:|.:      .:|..||.|.     ::.:.|..::.::...|:|    .
  Rat   240 RPWPALGRGFNTGVILLWLDRLQQIGWEQMWKLTAK-----RELLTLTATSLADQDIFNA----V 295

  Fly    71 NDQHPKIIRR-------EDSARTKELRSLLKCRD---------RSLRFERLQHGEFW-------- 111
            ..:||:::..       :.|..|...|..|:..|         :.||.:. :|.||:        
  Rat   296 IKEHPELVHPLPCVWNVQLSDHTLAERCYLEAADLKVIHWNSPKKLRVKN-KHAEFFRDLHLTFL 359

  Fly   112 ------LLQNL----------------VMGRKSREVGCAE-----------SVTYTTN------- 136
                  |.:.|                .:.:...|..|.|           .:|:.::       
  Rat   360 GFDGKLLCRELFGCPNQFPPGVEQLQQALAQLDEEEPCFEFRQQQLTVHRVHITFLSHQPPPPRP 424

  Fly   137 GDFTF-----FDNLEMVVS---RWRAPVSFAIHTPGYDLNTTLDAIRYVR--NCLPESDSIKDWV 191
            .|.|.     .|.|:|:.:   .||.|:|.|::.      |..:|.:::|  ...|...:.|| |
  Rat   425 HDVTLVAQLSMDRLQMLEALCRHWRGPMSLALYL------TDAEAQQFLRFVETSPVLSARKD-V 482

  Fly   192 SFHVYFPNQHMPEYVPYDEAEVLMYPHMCTLANGSLVSPLYTQIPTTDSYKSRANLTYPINVGRN 256
            ::||.:.:                             .||                 ||:|..||
  Rat   483 AYHVVYRD-----------------------------GPL-----------------YPVNQLRN 501

  Fly   257 IARLATNTHFIFACDIELYPSVGFVDQFLDMVARNHSVLALDPRQRRRVYPLPVFE-IETGAKVP 320
            :|.....|.::|..||:..|:....|.....:.:    |||..|||:....:|.|| :......|
  Rat   502 VALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ----LALGRRQRKAALVVPAFETLHYRFSFP 562

  Fly   321 VDKDELLALYRKQQAQVFHLKLCPTCHTIPGQEEWLNRTSRADDHLHVFSKALRKWKFRAWEPFY 385
            ..|.|||.|........|.....|..|.......|  |.::|...:        :|. ..:||:.
  Rat   563 NSKAELLTLLDAGSLHTFRYHEWPQGHASTDYTRW--REAQAPYRV--------QWS-ADYEPYV 616

  Fly   386 VSDNTEPLFDERVTWEGQSNKRIQVSYYCSQVSVSQCNLLLQNYAMCLLDYEYHVLSPAFLVHSP 450
            |.....|.:|.|....|. ||...:....:|                  :||:.||..||.:|.|
  Rat   617 VVPRDCPRYDPRFVGFGW-NKVAHIIELDAQ------------------EYEFLVLPEAFSIHLP 662

  Fly   451 GIKQSSKADSTRLQYAKEMTKFIKNKIEPEYR 482
               .:...|.:|.            :..|.||
  Rat   663 ---HAPSLDISRF------------RSSPTYR 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11149NP_608952.2 Glyco_transf_49 130..485 CDD:290607 79/371 (21%)
Large2XP_006234624.1 GT8_LARGE_C 92..371 CDD:133053 28/140 (20%)
RfaJ 93..>340 CDD:224359 22/108 (20%)
Glyco_transf_49 426..660 CDD:290607 71/320 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339831
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3765
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D729091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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