DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7236 and Cdkl4

DIOPT Version :9

Sequence 1:NP_608950.3 Gene:CG7236 / 33798 FlyBaseID:FBgn0031730 Length:438 Species:Drosophila melanogaster
Sequence 2:XP_038968990.1 Gene:Cdkl4 / 503009 RGDID:1583704 Length:342 Species:Rattus norvegicus


Alignment Length:392 Identity:193/392 - (49%)
Similarity:265/392 - (67%) Gaps:50/392 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 MDRYEKLSRLGEGSYGVVYKCRDRETGALVAVKRFVESEDDPAIRKIALREIRLLKNLKHPNLVS 111
            |::||||:::||||||||:|||::.:|.:||:|:||||||||.:|||||||||:||.|||||||:
  Rat     1 MEKYEKLAKIGEGSYGVVFKCRNKSSGQVVAIKKFVESEDDPVVRKIALREIRMLKQLKHPNLVN 65

  Fly   112 LLEVFRRKRRLHLVFEFCELTVLHELERHPQGCPEHLTKQICYQTLLGVAYCHKQGCLHRDIKPE 176
            |:|||||||::|||||:|:.|:|:||||:|.|..:.:.|.:.:|||..:.:|||..|:|||:|||
  Rat    66 LIEVFRRKRKMHLVFEYCDHTLLNELERNPNGVSDGVIKSVLWQTLQALNFCHKHNCIHRDVKPE 130

  Fly   177 NILLTAQGQVKLCDFGFARMLSPGENYTDYVATRWYRAPELLVGDTQYGTPVDVWAIGCLFAELV 241
            |||:..||.:|:|||||||:|.||:.||||||||||||||||||||:||:.||:||:||:||||:
  Rat   131 NILIAKQGVIKICDFGFARILIPGDAYTDYVATRWYRAPELLVGDTKYGSSVDIWAVGCVFAELL 195

  Fly   242 RGEALWPGRSDVDQLYLIRKTLGDLLPRHIQIFGQNEYFKGITLPVPPTLEPLEDKMPAKSQQNP 306
            .|:.||||:|||||||||.:|||.|:|||..||..|::|:||::|.|..:|.||:|.   |...|
  Rat   196 TGQPLWPGKSDVDQLYLIIRTLGKLIPRHQSIFKSNQFFRGISIPEPEDMETLEEKF---SNVQP 257

  Fly   307 LTIDFLKKCLDKDPTKRWSCEKLTKHSYFDDYIAKQRELEHVNSLEAANLRQQQLASQQFMLATA 371
            :.:.|:|.||..||.:|.:|.:|...:||:.:  ::.:::.....|..:.|:||           
  Rat   258 MALSFMKGCLKMDPDERLTCAQLLDSTYFESF--QEDQMKRKARSEGRSRRRQQ----------- 309

  Fly   372 AQQLQTGPAQAAAIAAARDKSKTSNTSLPLLPSTQHHHHPHQDYVKLQPLNKNANLLHRTEHHLP 436
                                    |..|||:|.:  |..|..|..|        ..:.....|||
  Rat   310 ------------------------NQLLPLIPGS--HISPTPDGRK--------QAVQLKFDHLP 340

  Fly   437 TI 438
            .|
  Rat   341 NI 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7236NP_608950.3 STKc_CDKL1_4 48..335 CDD:270837 173/286 (60%)
Pkinase 50..335 CDD:278497 173/284 (61%)
Cdkl4XP_038968990.1 STKc_CDKL1_4 2..286 CDD:270837 173/286 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52261
OrthoDB 1 1.010 - - D398098at2759
OrthoFinder 1 1.000 - - FOG0004639
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24056
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3254
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.030

Return to query results.
Submit another query.