DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7236 and Cdk12

DIOPT Version :10

Sequence 1:NP_608950.3 Gene:CG7236 / 33798 FlyBaseID:FBgn0031730 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_649325.2 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster


Alignment Length:396 Identity:125/396 - (31%)
Similarity:187/396 - (47%) Gaps:70/396 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QKIQVCNEPDLVETRQYRPQGSSKMDRYEKLSRLGEGSYGVVYKCRDRETGALVAVKRFVESEDD 87
            |:..:.|..|  .....|..|...:|.:|.::::|||:||.|||.||..|..:||:|:.....:.
  Fly   779 QRPVILNRRD--SRNNVRDWGERCVDVFEMIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHEK 841

  Fly    88 PAIRKIALREIRLLKNLKHPNLVSLLEV---------FRR-KRRLHLVFEFCELTVLHELERHPQ 142
            ......|:|||::|:.|.|.|:|:|.|:         ||: |...:||||:.:..::..||....
  Fly   842 EGFPITAVREIKILRQLNHRNIVNLHEIVTDKQDAVEFRKDKGSFYLVFEYMDHDLMGLLESGMV 906

  Fly   143 GCPEHLTKQICYQTLLGVAYCHKQGCLHRDIKPENILLTAQGQVKLCDFGFARMLSPGEN---YT 204
            ...|.....|..|.|.|:.||||:..||||||..|||:..:|:|||.|||.||:.:..:.   ||
  Fly   907 DFNEENNASIMKQLLDGLNYCHKKNFLHRDIKCSNILMNNRGKVKLADFGLARLYNADDRERPYT 971

  Fly   205 DYVATRWYRAPELLVGDTQYGTPVDVWAIGCLFAELVRGEALWPGRSDVDQLYLIRKTLGDLLPR 269
            :.|.|.|||.||||:|:.:||..:|||:.||:..||.....|:...:::.||..|.|..|..:|.
  Fly   972 NKVITLWYRPPELLLGEERYGPSIDVWSCGCILGELFVKRPLFQANAEMAQLETISKICGSPVPA 1036

  Fly   270 HIQIFGQNEYFKGITLPVPPTLEPLE----------DKMPAKSQQNPLTIDFLKKCLDKDPTKRW 324
                    .:...|.||:..||:..:          :.|||.:      :|.|.|.||.||.||.
  Fly  1037 --------VWPNVIKLPLFHTLKQKKTHRRRLREDFEFMPAPA------LDLLDKMLDLDPDKRI 1087

  Fly   325 SCEKLTKHSYFDDYIAKQRELEHVNSLEA---------------ANLRQQQLASQQFML------ 368
            :.|...:..:          |..:|..|.               :..|::|:..||..|      
  Fly  1088 TAEDALRSPW----------LRKINPDEMPTPQLPTWQDCHELWSKKRRRQMREQQESLPPTVIA 1142

  Fly   369 ATAAQQ 374
            :|..||
  Fly  1143 STKYQQ 1148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7236NP_608950.3 STKc_CDKL1_4 48..335 CDD:270837 109/309 (35%)
Cdk12NP_649325.2 STKc_CDK12 796..1098 CDD:270847 110/325 (34%)

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