DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7236 and Cdk5

DIOPT Version :10

Sequence 1:NP_608950.3 Gene:CG7236 / 33798 FlyBaseID:FBgn0031730 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster


Alignment Length:358 Identity:81/358 - (22%)
Similarity:128/358 - (35%) Gaps:89/358 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TLFPLEDWQSLNTNGLDAKLVFLVSTGLKEITHFPSMNVTWLDLSHNEIATMKTGCFANLTLLQV 103
            |||.||    |.|:..      .::.|:|..|  |......|..::.::...:|.....||..::
  Fly   434 TLFKLE----LPTSNT------AMARGIKIST--PESKCPELLANYCDMLLRRTPFSKRLTTEEI 486

  Fly   104 LDLSHNRLKSESL------NPDVFAGHY---------------STNEYMPLSKLRVLRLGANDLH 147
                .:|||...|      |.|||..::               |..|...:..||.:.:.|:.::
  Fly   487 ----ESRLKDVLLVLKYVSNKDVFMRYHKAHLTRRLILDSSADSEKEEDMVEWLREVGMPADYVN 547

  Fly   148 SLNPDLFEHLPALEELSLELNPFKVIDQQSEIAIASI-------ERL-VSLDLSYMELED-IP-- 201
            .| ..:|:.:...|:|:.:............|.|.:.       ||: |||.|   |||| ||  
  Fly   548 KL-ARMFQDIKVSEDLNTQFRSQTTRHDAINIKILNAGAWARGSERVSVSLPL---ELEDYIPEV 608

  Fly   202 -------------KYLFHTPRG-LRYLNLTGNLLQEVPAALSYATALAWLSLDENPIS--SIVVG 250
                         ::..|...| :.:.|.||....:| .....|...||.......:|  ::.:.
  Fly   609 EEFYKKKHSGRKLQWYHHMSNGTITFANNTGRFDLDV-TTFQMAVLFAWNQRPNEKVSYENLRLA 672

  Fly   251 TEFPSLK-QLTFLSLSYMSQLK---VIGRGAFSGLESLQEVHITNNPHLTYLHGHAFVRNDTDNP 311
            ||.|..: :.|..||....:||   ::...|.|..:.     .|.|.........|.::|  ..|
  Fly   673 TELPDPELRRTLWSLVAFPKLKRQLLVYEPAISNPKD-----FTENTLFWVNQEFAIIKN--GKP 730

  Fly   312 ER-----LDWPPVKRLYLHNNNISYLDAQLLVQ 339
            :|     |    |.||.|........|.|.:||
  Fly   731 QRRGKVNL----VGRLQLSTERSQQEDNQSIVQ 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7236NP_608950.3 STKc_CDKL1_4 48..335 CDD:270837 73/343 (21%)
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344
Blue background indicates that the domain is not in the aligned region.

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