DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7236 and cdk-7

DIOPT Version :9

Sequence 1:NP_608950.3 Gene:CG7236 / 33798 FlyBaseID:FBgn0031730 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_001370652.1 Gene:cdk-7 / 171784 WormBaseID:WBGene00000408 Length:330 Species:Caenorhabditis elegans


Alignment Length:309 Identity:109/309 - (35%)
Similarity:160/309 - (51%) Gaps:45/309 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 RYEKLSRLGEGSYGVVYKCRDRETGALVAVKRF-----VESEDDPAIRKIALREIRLLKNLKHPN 108
            ||:.:..||||.:..||..:|.|:|..||:|:.     .|::|  .|.:.|:|||:|||.:.|.|
 Worm     4 RYDTIKHLGEGQFANVYLAQDLESGECVAIKKIKLGSREEAKD--GINRTAIREIKLLKEIHHDN 66

  Fly   109 LVSLLEVFRRKRRLHLVFEFCELTVLHEL-ERHPQGCPEHLTKQICYQTLLGVAYCHKQGCLHRD 172
            ::.|.:|...:..:.|||:|.:..:.|.: ::.....|.|: |.|..|.|||:.:.|....||||
 Worm    67 IIGLRDVIGHRTSIQLVFDFMDTDLEHVIKDKEIILMPAHI-KNITMQMLLGLEFLHVHWILHRD 130

  Fly   173 IKPENILLTAQGQVKLCDFGFARML-SPGENYTDYVATRWYRAPELLVGDTQYGTPVDVWAIGCL 236
            :||.|:|:...|:|||.|||.||.. ||..|||..|.||||||||||.|...||..:|:|::||:
 Worm   131 LKPNNLLMNKMGRVKLTDFGLARFFGSPNRNYTHQVVTRWYRAPELLFGARSYGVGIDIWSVGCI 195

  Fly   237 FAELVRGEALWPGRSDVDQLYLIRKTLGDLLPRHIQIFGQNEYFKGITLPVP---PTLEPLEDKM 298
            .|||:....::||.||:|||..|...||                    .|.|   |.:..:...:
 Worm   196 IAELLLRNPIFPGESDIDQLVKIFNILG--------------------CPTPETWPNMTEMNSYV 240

  Fly   299 PAKSQQNPLTIDFL-----KKCLDK-------DPTKRWSCEKLTKHSYF 335
            ..|.|...:.:::.     :..||.       ||.||.:|.:..:..||
 Worm   241 IIKPQTEYMALNYYFSAAPQDLLDLMAGMWTFDPIKRLTCTQSLQMEYF 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7236NP_608950.3 STKc_CDKL1_4 48..335 CDD:270837 107/307 (35%)
Pkinase 50..335 CDD:278497 106/306 (35%)
cdk-7NP_001370652.1 STKc_CDK7 4..302 CDD:270833 109/309 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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