DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7236 and Cdk4

DIOPT Version :9

Sequence 1:NP_608950.3 Gene:CG7236 / 33798 FlyBaseID:FBgn0031730 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_034000.1 Gene:Cdk4 / 12567 MGIID:88357 Length:303 Species:Mus musculus


Alignment Length:304 Identity:109/304 - (35%)
Similarity:164/304 - (53%) Gaps:32/304 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 RYEKLSRLGEGSYGVVYKCRDRETGALVAVKRFVESEDDPA--------IRKIALREIRLLKNLK 105
            |||.::.:|.|:||.|||.||..:|..||:|.........|        :|::||  :|.|:..:
Mouse     5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGAAGGGLPVSTVREVAL--LRRLEAFE 67

  Fly   106 HPNLVSLLEVFRRKR-----RLHLVFEFCELTVLHELER-HPQGCPEHLTKQICYQTLLGVAYCH 164
            |||:|.|::|....|     ::.||||..:..:...|:: .|.|.|....|.:..|.|.|:.:.|
Mouse    68 HPNVVRLMDVCATSRTDRDIKVTLVFEHIDQDLRTYLDKAPPPGLPVETIKDLMRQFLSGLDFLH 132

  Fly   165 KQGCLHRDIKPENILLTAQGQVKLCDFGFARMLSPGENYTDYVATRWYRAPELLVGDTQYGTPVD 229
            ....:|||:||||||:|:.|.|||.|||.||:.|.....|..|.|.||||||:|:..| |.||||
Mouse   133 ANCIVHRDLKPENILVTSNGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST-YATPVD 196

  Fly   230 VWAIGCLFAELVRGEALWPGRSDVDQLYLIRKTLGDLLPRHIQIFGQNEYFKGITLP----VPPT 290
            :|::||:|||:.|.:.|:.|.|:.|||..|...:|  ||      .::::.:.::||    .|..
Mouse   197 MWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG--LP------PEDDWPREVSLPRGAFAPRG 253

  Fly   291 LEPLEDKMPAKSQQNPLTIDFLKKCLDKDPTKRWSCEKLTKHSY 334
            ..|::..:|...:..   ...|.:.|..:|.||.|..:..:|||
Mouse   254 PRPVQSVVPEMEESG---AQLLLEMLTFNPHKRISAFRALQHSY 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7236NP_608950.3 STKc_CDKL1_4 48..335 CDD:270837 109/304 (36%)
Pkinase 50..335 CDD:278497 108/303 (36%)
Cdk4NP_034000.1 STKc_CDK4 5..295 CDD:143368 109/304 (36%)
Required for binding D-type cyclins. /evidence=ECO:0000250 50..56 0/5 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.