DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and TCP1

DIOPT Version :10

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_010498.1 Gene:TCP1 / 851798 SGDID:S000002620 Length:559 Species:Saccharomyces cerevisiae


Alignment Length:596 Identity:137/596 - (22%)
Similarity:240/596 - (40%) Gaps:151/596 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKL 97
            |.::|...:.....:|:.|..::||.|.:.::....|...:|.||.|:   ::|.| .|:...|:
Yeast    22 GDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATI---LSLLD-VQHPAGKI 82

  Fly    98 VQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAI-ETVKDNLRRLSRP 161
            :.::|...:.|.|||||:..::|..:.|...|.:.....|..|..|..:|: |.::.....||..
Yeast    83 LVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTS 147

  Fly   162 VNT--PEEICQVATISANGDKSVG-------NLISE---AIKKVGRDGVI--TVK-------DGK 205
            |:|  .|.:..:|..|.: .|.:|       |::.:   |:|.....|.|  .||       .||
Yeast   148 VDTLGKETLINIAKTSMS-SKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGK 211

  Fly   206 TLCDELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALELANAQRKP 270
            :..:.| ::.|          |.:|.:..::.         ..|:|......:..|:| |.|:..
Yeast   212 SATESL-LVPG----------YALNCTVASQA---------MPKRIAGGNVKIACLDL-NLQKAR 255

  Fly   271 LVI-----IAEDLEAEAL----STLVVNRLK----VGLQV----------CA---VKAPGFGDNR 309
            :.:     |.:..:.|.:    :.:|:.|:|    .|.||          |.   |:|...|..|
Yeast   256 MAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRR 320

  Fly   310 --KENLMDMAVATGGIVFGDEANMVRLEDIKMSDFGRVGEVVVSK---DDTMLLKGKGQKAEVEK 369
              ||:|..:|.|||..:....:|:...|..:.|..|...|||.:|   |:.:|:||         
Yeast   321 CKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKG--------- 376

  Fly   370 RVEGLREAIKESTSSYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEE 434
                        ||.:            ||...:||  |::|..:.|.:..:.|:|:..:..:|.
Yeast   377 ------------TSKH------------SSSSIILR--GANDYSLDEMERSLHDSLSVVKRTLES 415

  Fly   435 G-IVPGGGTALLRCIQKL------NDLKGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVA 492
            | :|||||     |::..      |........:.:.|.....||.:...|:|.||..|.:.:||
Yeast   416 GNVVPGGG-----CVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVA 475

  Fly   493 KVEILDG----------------DYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTT 541
            |:.....                :||.|.::|:..:.|..|:::||         .:.|.||.:.
Yeast   476 KLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPT---------ISKVKSLKSA 531

  Fly   542 AEAVVTELPLE 552
            .||.|..|.::
Yeast   532 LEACVAILRID 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 GroEL 28..548 CDD:239460 136/590 (23%)
TCP1NP_010498.1 TCP1_alpha 17..549 CDD:239451 137/596 (23%)

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