DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60C and TCP1

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_010498.1 Gene:TCP1 / 851798 SGDID:S000002620 Length:559 Species:Saccharomyces cerevisiae


Alignment Length:596 Identity:137/596 - (22%)
Similarity:240/596 - (40%) Gaps:151/596 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKL 97
            |.::|...:.....:|:.|..::||.|.:.::....|...:|.||.|:   ::|.| .|:...|:
Yeast    22 GDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATI---LSLLD-VQHPAGKI 82

  Fly    98 VQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAI-ETVKDNLRRLSRP 161
            :.::|...:.|.|||||:..::|..:.|...|.:.....|..|..|..:|: |.::.....||..
Yeast    83 LVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTS 147

  Fly   162 VNT--PEEICQVATISANGDKSVG-------NLISE---AIKKVGRDGVI--TVK-------DGK 205
            |:|  .|.:..:|..|.: .|.:|       |::.:   |:|.....|.|  .||       .||
Yeast   148 VDTLGKETLINIAKTSMS-SKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGK 211

  Fly   206 TLCDELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALELANAQRKP 270
            :..:.| ::.|          |.:|.:..::.         ..|:|......:..|:| |.|:..
Yeast   212 SATESL-LVPG----------YALNCTVASQA---------MPKRIAGGNVKIACLDL-NLQKAR 255

  Fly   271 LVI-----IAEDLEAEAL----STLVVNRLK----VGLQV----------CA---VKAPGFGDNR 309
            :.:     |.:..:.|.:    :.:|:.|:|    .|.||          |.   |:|...|..|
Yeast   256 MAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRR 320

  Fly   310 --KENLMDMAVATGGIVFGDEANMVRLEDIKMSDFGRVGEVVVSK---DDTMLLKGKGQKAEVEK 369
              ||:|..:|.|||..:....:|:...|..:.|..|...|||.:|   |:.:|:||         
Yeast   321 CKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKG--------- 376

  Fly   370 RVEGLREAIKESTSSYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEE 434
                        ||.:            ||...:||  |::|..:.|.:..:.|:|:..:..:|.
Yeast   377 ------------TSKH------------SSSSIILR--GANDYSLDEMERSLHDSLSVVKRTLES 415

  Fly   435 G-IVPGGGTALLRCIQKL------NDLKGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVA 492
            | :|||||     |::..      |........:.:.|.....||.:...|:|.||..|.:.:||
Yeast   416 GNVVPGGG-----CVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVA 475

  Fly   493 KVEILDG----------------DYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTT 541
            |:.....                :||.|.::|:..:.|..|:::||         .:.|.||.:.
Yeast   476 KLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPT---------ISKVKSLKSA 531

  Fly   542 AEAVVTELPLE 552
            .||.|..|.::
Yeast   532 LEACVAILRID 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 137/596 (23%)
GroEL 28..548 CDD:239460 136/590 (23%)
TCP1NP_010498.1 TCP1_alpha 17..549 CDD:239451 137/596 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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