DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60C and CCT4

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_010138.1 Gene:CCT4 / 851412 SGDID:S000002302 Length:528 Species:Saccharomyces cerevisiae


Alignment Length:595 Identity:134/595 - (22%)
Similarity:234/595 - (39%) Gaps:162/595 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 EVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKLVQ 99
            |||...:.....:|||:..::||||.:.:|:.|.|...|:.||.|:.|.:|:....    |:::.
Yeast    19 EVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLV 79

  Fly   100 DVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEI--------RRGVMLAIE-----TV 151
            :|:...:.|||||||:..:|..|:.......:::|..|..|        :|.|.:.:|     ::
Yeast    80 EVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSL 144

  Fly   152 KDNLRRLSRPVNT---------------PEEICQVATISANGDKSVGNLISEAIKKVGRDGVITV 201
            .|. .:|.|..:|               |..:..|..||....|:|.......:||||  |.|  
Yeast   145 SDR-EQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVG--GTI-- 204

  Fly   202 KDGKTLCDELEVIEGMKFDRGYI----SPYFINTSKGAKVEFQDA-------------------- 242
                   |:.|:|:|:...:..|    .|.....:|...::||.:                    
Yeast   205 -------DDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDK 262

  Fly   243 --------LLLFCEKKIKSAPSIVPALELANAQRKPLVIIAEDLEAEALSTLVVNRLKVGLQVCA 299
                    ||..| ||||.|...|             ::|.:.:..:|::.|.::.|. .|.:..
Yeast   263 ILKEERAYLLNIC-KKIKKAKCNV-------------LLIQKSILRDAVNDLALHFLS-KLNIMV 312

  Fly   300 VKAPGFGDNRKENLMDMAVATGGIVFGDEANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQK 364
            ||     |..:|.:..::...|         ...:.||::....|:|    |.|....:...|.|
Yeast   313 VK-----DIEREEIEFLSKGLG---------CKPIADIELFTEDRLG----SADLVEEIDSDGSK 359

  Fly   365 AEVEKRVEGLREAIKESTSSYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATR 429
            .   .||.|:|......|.|                   :.:.|::::.:.|.:..:.|||...|
Yeast   360 I---VRVTGIRNNNARPTVS-------------------VVIRGANNMIIDETERSLHDALCVIR 402

  Fly   430 AAVEE-GIVPGGGTALLRCIQKLNDLKGANEDQNM-GIEI-----IRRALRMPCLTIAKNAGVDG 487
            ..|:| |::.|||...:...::|     :.|.::| |::.     ...||.:...|:|:|||::.
Yeast   403 CLVKERGLIAGGGAPEIEISRRL-----SKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNS 462

  Fly   488 AMVVAKV-------EILDGDYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTTAEAV 545
            ..||.::       |:.|   |....:....|..|..|:.|..|..:||:.|         :|.|
Yeast   463 IKVVTELRSKHENGELND---GISVRRSGTTNTYEEHILQPVLVSTSAITLA---------SECV 515

  Fly   546 VTELPLEEAA 555
            .:.|.:::.|
Yeast   516 KSILRIDDIA 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 133/591 (23%)
GroEL 28..548 CDD:239460 132/586 (23%)
CCT4NP_010138.1 chap_CCT_delta 11..528 CDD:274083 134/595 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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