DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and AT5G20890

DIOPT Version :10

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_197589.1 Gene:AT5G20890 / 832213 AraportID:AT5G20890 Length:527 Species:Arabidopsis thaliana


Alignment Length:575 Identity:131/575 - (22%)
Similarity:236/575 - (41%) Gaps:127/575 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWG---SPKITKDGVTVAKSIALKDKFQNIG 94
            |...|.....|...::|.|..|:||||.:.|: ||.|   :..:|.||.|:.||:.:    .|..
plant    16 GERARMASFVGAMAISDLVKSTLGPKGMDKIL-QSTGRGHAVTVTNDGATILKSLHI----DNPA 75

  Fly    95 AKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAIETVKDNLRRLS 159
            ||::.|::...::|.|||||:..|||..:.:|..:.::....|:.|..|..:|.|..::.|  |.
plant    76 AKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMASECARNAL--LK 138

  Fly   160 RPVNTPEEICQVATISANGDKSVGNLI---------------SEAIKKVGRDGVITVKDGKTLCD 209
            |.::..:          |.:|...:|:               .|...::..|.|..:| |.|..:
plant   139 RVIDNKD----------NAEKFRSDLLKIAMTTLCSKILSQDKEHFAEMAVDAVFRLK-GSTNLE 192

  Fly   210 ELEVIE----GMK---FDRGYISPYFINTSKGAKVEFQDALL----LFCEK-KIKSA----PSIV 258
            .:::|:    .:|   .|.|:|....|...:..::|..:.|:    :..:| ||..|    .|:.
plant   193 AIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGARVRVDSMT 257

  Fly   259 PALELANAQRKPL-----VIIAEDLEAEALSTLVVN---RLKVGLQVCAVKAPGFGDNRKENLMD 315
            ...|:..|:::.:     .||...:.......|:.|   .|.....:.|::...|     |.:..
plant   258 KVAEIEGAEKEKMKDKVKKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADF-----EGIER 317

  Fly   316 MAVATGGIVFGDEANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKG--KGQKAEVEKRVEGLREAI 378
            :.:.|||.:.....|.   |.:|:.....:.|:::.:|..:...|  .||...:..|        
plant   318 LGLVTGGEIASTFDNP---ESVKLGHCKLIEEIMIGEDKLIHFSGCEMGQACSIVLR-------- 371

  Fly   379 KESTSSYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDAL-------NATRAAVEEGI 436
                                         |:|...:.|.:..:.|||       |.||      :
plant   372 -----------------------------GASHHVLDEAERSLHDALCVLSQTVNDTR------V 401

  Fly   437 VPGGGTALLRCIQKLNDL--KGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKVEI--- 496
            :.|||...:...:::::|  |.|.: ::..||...|||.....|||.|||:|.|.:||::..   
plant   402 LLGGGWPEMVMAKEVDELARKTAGK-KSHAIEAFSRALVAIPTTIADNAGLDSAELVAQLRAEHH 465

  Fly   497 LDG-DYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTTAEAVVTELP 550
            .:| :.|.|.:.|..|:|.||||.:..||.:..:..|...:.::...:.::|..|
plant   466 TEGCNAGIDVITGAVGDMEERGIYEAFKVKQAVLLSATEASEMILRVDEIITCAP 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 GroEL 28..548 CDD:239460 129/571 (23%)
AT5G20890NP_197589.1 TCP1_beta 6..522 CDD:239452 131/575 (23%)

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