DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60C and Cpn60alpha2

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_197383.1 Gene:Cpn60alpha2 / 832000 AraportID:AT5G18820 Length:575 Species:Arabidopsis thaliana


Alignment Length:528 Identity:216/528 - (40%)
Similarity:329/528 - (62%) Gaps:11/528 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 AKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQ 91
            ||.:.:|.:.|..:..|:|.|||||::|:||:||||::.:. .:.|:..||||:||||.|.|..:
plant    35 AKRILYGKDSREKLQAGIDKLADAVSITLGPRGRNVVLAEK-DTIKVINDGVTIAKSIELPDTIE 98

  Fly    92 NIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAIETVKDNLR 156
            |.||.|:|:||...||.||||||||.:|||.:.|.|...|:.||:.|.::.|:.   :|||:.:|
plant    99 NAGATLIQEVAIKMNESAGDGTTTAIILAREMIKAGSLAIAFGANAVSVKNGMN---KTVKELVR 160

  Fly   157 RL---SRPVNTPEEICQVATISANGDKSVGNLISEAIKKVGRDGVITVKDGKTLCDELEVIEGMK 218
            .|   |.||....:|..||:|||..|:.|||||:|.::|:|.||||:::...|....:.|.||||
plant   161 VLQMKSIPVQGKNDIKAVASISAGNDEFVGNLIAETVEKIGPDGVISIESSSTSETSVIVEEGMK 225

  Fly   219 FDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALELANAQRKPLVIIAEDLEAEAL 283
            ||:||:||:||...:.:.|||..|.:|..::||.||..:||.||..:....||:|||||:.||.|
plant   226 FDKGYMSPHFITNQEKSTVEFDKAKILVTDQKITSAKELVPLLEKTSQLSVPLLIIAEDISAEVL 290

  Fly   284 STLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVFGDEANMVRLEDIKMSDFGRVGEV 348
            ..||||:.:..:.|..||.||..|.:|..|.|:|:.||......:..| .|........|....|
plant   291 EILVVNKKQGLINVAVVKCPGMLDGKKALLQDIALMTGADYLSGDLGM-SLMGATSDQLGVSRRV 354

  Fly   349 VVSKDDTMLLKGKGQKAEVEKRVEGLREAIKESTSSYEKEKMQERLARLSSGVALLRVGGSSDVE 413
            |::.:.|.::.....|.|::.|:..:::.:.|:.:||..:|:.||:|:|:.|||:::|||.::.|
plant   355 VITANSTTIVADASTKPEIQARIAQMKKDLAETDNSYLSKKIAERIAKLTGGVAVIKVGGHTETE 419

  Fly   414 VSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCIQKLNDL-KGANED--QNMGIEIIRRALRMP 475
            :.::|.|:.||.|||.||:.||||||||...:..:.::..: |...||  :.:|.:|:..||..|
plant   420 LEDRKLRIEDAKNATFAAMREGIVPGGGATYIHLLDEIPRIKKNLMEDSYEQIGADIVAMALTAP 484

  Fly   476 CLTIAKNAGVDGAMVVAKVEILDGDYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLT 540
            .:.||.||||||::||.|...|:...||:|:.|:|.:::..||.||.:|.|.|:.:|..||.::.
plant   485 AMAIATNAGVDGSVVVQKTRELEWRSGYNAMSGKYEDLLNAGIADPCRVSRFALQNAVSVAGIIL 549

  Fly   541 TAEAVVTE 548
            |.:||:.|
plant   550 TTQAVLVE 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 216/528 (41%)
GroEL 28..548 CDD:239460 214/525 (41%)
Cpn60alpha2NP_197383.1 GroEL 36..557 CDD:239460 214/525 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.780

Return to query results.
Submit another query.