DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and Cpn60beta2

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_187956.1 Gene:Cpn60beta2 / 820549 AraportID:AT3G13470 Length:596 Species:Arabidopsis thaliana


Alignment Length:539 Identity:246/539 - (45%)
Similarity:357/539 - (66%) Gaps:11/539 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 AKDVRF---GPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKD 88
            ||::.|   |..:|.:. .||:.|||.|.||:|||||||::|..:|||:|..||||||:.:.|:|
plant    52 AKELHFNKDGTTIRKLQ-TGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELED 115

  Fly    89 KFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAIETVKD 153
            ..:|||||||:..|..||:.|||||||:.|||:....||.:.::.||:||.|.||:....:.:.:
plant   116 PVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVN 180

  Fly   154 NLRRLSRPVNTPEEICQVATISANGDKSVGNLISEAIKKVGRDGVITVKDGKTLCDELEVIEGMK 218
            .|:.:|:.|. ..|:..||.:||..:..||::|:||:.||||.||:|:::||:..:.|.|:|||:
plant   181 ELKLMSKEVE-DSELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQ 244

  Fly   219 FDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALELANAQRKPLVIIAEDLEAEAL 283
            ||||||||||:..|:...||:.:..||..:||:.:|..:|..||.|.....|::|||||:|.|||
plant   245 FDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGVLEDAIRGGYPILIIAEDIEQEAL 309

  Fly   284 STLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVFGDEANMVRLEDIKMSDFGRVGEV 348
            :|||||:|:..|::.|:||||||:.:.:.|.|:|:.||..|..:|..: .|:.......|...:|
plant   310 ATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGL-SLDKAGKEVLGNASKV 373

  Fly   349 VVSKDDTMLLKGKGQKAE-VEKRVEGLREAIKESTSSYEKEKMQERLARLSSGVALLRVGGSSDV 412
            |::|:.|.:: |.|...| |.|||..:|..|:::...|||||:.||:|:||.|||:::||..::.
plant   374 VLTKEMTTIV-GDGTTQEAVNKRVVQIRNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTET 437

  Fly   413 EVSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCIQKLNDLKGA--NEDQNMGIEIIRRALRMP 475
            |:.|||.||.||||||:||||||||.|||..|||...|::.:|..  |:::.:|.||::|||..|
plant   438 ELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLENDEEKVGAEIVKRALSYP 502

  Fly   476 CLTIAKNAGVDGAMVVAKVEILDG-DYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLL 539
            ...|||||||:|::|..||...|. .:||:|..|:|.:::..||||||||||..:..||.||...
plant   503 LKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTF 567

  Fly   540 TTAEAVVTELPLEEAAAAG 558
            ..::.||.|:|..|...||
plant   568 LMSDCVVVEIPEPEPVPAG 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 243/532 (46%)
GroEL 28..548 CDD:239460 240/526 (46%)
Cpn60beta2NP_187956.1 PLN03167 1..596 CDD:215611 246/539 (46%)
groEL 51..596 CDD:237231 246/539 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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