DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and AT3G11830

DIOPT Version :10

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_187789.1 Gene:AT3G11830 / 820356 AraportID:AT3G11830 Length:557 Species:Arabidopsis thaliana


Alignment Length:593 Identity:148/593 - (24%)
Similarity:241/593 - (40%) Gaps:118/593 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RAMMLQGVD---VLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKLV 98
            :|.::..::   .:.|.|..|:||:|.:.:|....||..|:.||.|:.|.:.:    .:..||::
plant    22 KAQLVSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGATIMKLLDI----VHPAAKIL 82

  Fly    99 QDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEI----RRGVMLAIETVKDNLRRLS 159
            .|:|.:.:.|.||||||..:||....||....|..|.....:    |....|||..||:  ..:|
plant    83 VDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSYRTASTLAIAKVKE--LAVS 145

  Fly   160 RPVNTPEE------ICQVATISA---NGDKS-VGNLISEAIKKVGRD---GVITVK--DGKTLCD 209
            ....:.||      .|...|:|:   .|:|. ...::.:|:..:|.|   .:|.:|  .|..:.|
plant   146 IEGKSVEEKKGLLAKCAATTLSSKLIGGEKEFFATMVVDAVMAIGNDDRLNLIGIKKVPGGNMRD 210

  Fly   210 ELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALELANAQRKPLVII 274
            .. :::|:.|.:.:....|....|  |......|||..|.::||..... .:.|::..:...::.
plant   211 SF-LVDGVAFKKTFSYAGFEQQPK--KFLNPKILLLNIELELKSEKENA-EIRLSDPSQYQSIVD 271

  Fly   275 AE--------DLEAEALSTLVVNRLKVGLQV----------CAVKAPGFGDNRKENLMDMAVATG 321
            ||        |...|:.:.:|::||.:|...          ||      |...:|:|..:|.|.|
plant   272 AEWNIIYDKLDKCVESGAKVVLSRLAIGDLATQYFADRDIFCA------GRVAEEDLNRVAAAAG 330

  Fly   322 GIVFGDEANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVEGLREAIKESTSSYE 386
            |.|.....|::                     |.:|  |..:..| ||:|.|.|..|.....   
plant   331 GTVQTSVNNII---------------------DEVL--GTCEIFE-EKQVGGERFNIFSGCP--- 368

  Fly   387 KEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEEG-IVPGGG------TAL 444
                       |...|.:.:.|.:|..:.|.:..:.||:...|.||:.. :|||||      :..
plant   369 -----------SGRTATIVLRGGADQFIEEAERSLHDAIMIVRRAVKNSTVVPGGGAIDMEISKY 422

  Fly   445 LRCIQKLNDLKGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKVE----ILDGD---YG 502
            ||  |....:.|.::   :.|....:||.:....:..|||.|...|:.|:.    :..|:   ||
plant   423 LR--QHSRTIAGKSQ---LFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHAMQSGEGASYG 482

  Fly   503 YDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTTAEAVVTELPLEEAA---AAGAAAGLG 564
            .|...|...:.....:.:|..|...||:.|...|.|:.:.:..|.. |..|:|   ||| |.|.|
plant   483 VDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKN-PKSESAQGDAAG-AMGRG 545

  Fly   565 ALGGMGMG 572
            ..||.|.|
plant   546 RGGGRGRG 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 GroEL 28..548 CDD:239460 135/564 (24%)
AT3G11830NP_187789.1 TCP1_eta 8..531 CDD:239456 136/568 (24%)

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