DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and HSP60-2

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_850203.1 Gene:HSP60-2 / 817883 AraportID:AT2G33210 Length:585 Species:Arabidopsis thaliana


Alignment Length:585 Identity:336/585 - (57%)
Similarity:441/585 - (75%) Gaps:14/585 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MFRYTNTLQRTAKI---------SHVLWARNY-AKDVRFGPEVRAMMLQGVDVLADAVAVTMGPK 58
            |:|..:.:...|:|         |.:...||| |||:|||.|.||:||:||:.|||||.||||||
plant     1 MYRLVSNVASKARIARKCTSQIGSRLNSTRNYAAKDIRFGVEARALMLRGVEDLADAVKVTMGPK 65

  Fly    59 GRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAI 123
            |||||||||||:||:|||||||||||..||:.:|:||.||:.|||.||:.||||||.||||.|||
plant    66 GRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGTTCATVLTRAI 130

  Fly   124 AKEGFEKISRGASPVEIRRGVMLAIETVKDNLRRLSRPVNTPEEICQVATISANGDKSVGNLISE 188
            ..||.:.::.|.:.:::|||:.||::||..||:..:|.::|.|||.||.|||||||:.:|.||::
plant   131 FTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGTISANGDREIGELIAK 195

  Fly   189 AIKKVGRDGVITVKDGKTLCDELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKS 253
            |::.||::||||::|||||.:||||:||||.||||||||||...|..|.|.:|.|:|..||||.:
plant   196 AMETVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNPKTQKCELEDPLILIHEKKISN 260

  Fly   254 APSIVPALELANAQRKPLVIIAEDLEAEALSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAV 318
            ..::|..||||..:::||:|:|||:|::||:||::|:|:..::||||||||||:|||.||.|:|.
plant   261 INAMVKVLELALKKQRPLLIVAEDVESDALATLILNKLRANIKVCAVKAPGFGENRKANLHDLAA 325

  Fly   319 ATGGIVFGDEANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVEGLREAIKESTS 383
            .||..|..:|..| .|::|.:|.||...:|.||||||::|.|.|.|..:.:|.|.:|..::.|||
plant   326 LTGAQVITEELGM-NLDNIDLSMFGNCKKVTVSKDDTVVLDGAGDKQAIGERCEQIRSMVEASTS 389

  Fly   384 SYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCI 448
            .|:|||:|||||:||.|||:|::||:|:.|||||||||.||||||:||||||||||||.|||...
plant   390 DYDKEKLQERLAKLSGGVAVLKIGGASETEVSEKKDRVTDALNATKAAVEEGIVPGGGVALLYAS 454

  Fly   449 QKLNDLKGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKVEILDG-DYGYDALKGEYGN 512
            ::|..|..||.||.:|::||:.||:.|..|||.||||:||:||.|:...|. |.||||.||||.:
plant   455 KELEKLSTANFDQKIGVQIIQNALKTPVYTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVD 519

  Fly   513 MIERGIIDPTKVVRTAISDAAGVASLLTTAEAVVTELPLEEAAAAG-AAAGLGALGGM-GMGGMG 575
            ||:.|||||.||:|||:.|||.|:|||||.||||||:|.:|.|:.| ...|:|.:||| ||||||
plant   520 MIKAGIIDPLKVIRTALVDAASVSSLLTTTEAVVTEIPTKEVASPGMGGGGMGGMGGMGGMGGMG 584

  Fly   576  575
            plant   585  584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 317/531 (60%)
GroEL 28..548 CDD:239460 310/520 (60%)
HSP60-2NP_850203.1 PTZ00114 21..560 CDD:185455 318/539 (59%)
GroEL 35..555 CDD:239460 310/520 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 580 1.000 Domainoid score I40
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H138110
Inparanoid 1 1.050 652 1.000 Inparanoid score I167
OMA 1 1.010 - - QHG61846
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 1 1.000 - - mtm993
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1504
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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