DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60C and CCT1

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster


Alignment Length:598 Identity:125/598 - (20%)
Similarity:236/598 - (39%) Gaps:125/598 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKL 97
            |..||...:.....:::.|..::||.|.:.::....|...:|.||.|:.:.:    :.::..||:
  Fly    17 GASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLL----EVEHPAAKV 77

  Fly    98 VQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAIETVKDNLRRLSRPV 162
            :.::|...:||.|||||:..:||..:.|...|.:.:...|..|..|..:|.              
  Fly    78 LVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIAC-------------- 128

  Fly   163 NTPEEICQVATISANGDKSVGNLISEAIKKVGRDGVITVKDGKTLCDELEVIEGMKFDRGYISPY 227
               :|.|          |.:...::..:.::|||.:|.:  .||.... ::|..   |..:.|..
  Fly   129 ---KEAC----------KYISEHLTAPVDELGRDSLINI--AKTSMSS-KIIGA---DAEFFSAM 174

  Fly   228 FINTSKGAKVEFQDALLLFCEKKI-------KSAPS--IVPALEL---ANAQRKPLVIIAEDLEA 280
            .::.::..|:........:..|.|       |||..  ::|...|   ..:|:.|..|:...:..
  Fly   175 VVDAAQSVKITDPRGQAAYSIKAINVLKAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIAC 239

  Fly   281 EALSTLVVNRLKVGLQVC--------AVKAPGFGDNRKENL-------MDMAVATGGI-----VF 325
            ...| |...::|:|:||.        |::|... |..||.:       :::.:.:||:     .:
  Fly   240 LDFS-LQKTKMKMGVQVLINDPDKLEAIRAREL-DITKERINMILGTGVNVVLVSGGVDDLCMKY 302

  Fly   326 GDEANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVEGLREAIKESTSSYEKEKM 390
            ..||..:.:..:|.||...:.:...:...|.|....|:::.....|....|..:|.....|...:
  Fly   303 FVEAGAMAVRRVKKSDLKIIAKATGAAFITSLTNMDGEESFDASMVGEAAEVAQERICDDELILI 367

  Fly   391 QERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVE-EGIVPGGGTALLRCIQKLNDL 454
            :...||.::.: :||  |.:|....|.:..|.|||...:..:| :.:|.|||     |::....:
  Fly   368 KGTKARAAASI-ILR--GPNDFYCDEMERSVHDALCVVKRVLESKKVVAGGG-----CVEAALSI 424

  Fly   455 -------KGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKVEILDGD------------ 500
                   ..|:.:|....|..:..|.:| .|::.||..|...:|||:......            
  Fly   425 YLENFATSLASREQLAIAEFAKSLLVIP-KTLSVNAAKDATDLVAKLRSYHNSSQTKPERSDLKW 488

  Fly   501 YGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTTAEAVVTELPLE------------- 552
            .|.|.::|...:..:.|:::|      |:|.   :.||....||.:|.|.::             
  Fly   489 TGLDLIEGVVRDNKKAGVLEP------AMSK---IKSLKFATEAAITILRIDDMIKLNPEDKSGK 544

  Fly   553 ---EAAAAGAAAG 562
               :|.|||...|
  Fly   545 SYADACAAGELDG 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 120/587 (20%)
GroEL 28..548 CDD:239460 118/566 (21%)
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 120/577 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453463
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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