DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and CCT3

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster


Alignment Length:570 Identity:130/570 - (22%)
Similarity:224/570 - (39%) Gaps:121/570 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKL 97
            |.:|:...:|....:||.:...:||:....::....|...:|.||..:.:.|.:    |:..||.
  Fly    20 GRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITV----QHPAAKS 80

  Fly    98 VQDVANNTNEEAGDGTTTATVLARAI--AKEGFEKISRGASPVEIRRGVMLAIETVKDNLR-RLS 159
            :.::|...:||.|||||:..|||..:  |.|.|  :.:...|..|.|....|:|.:..:|: :||
  Fly    81 MIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPF--LQQQIHPTVIIRAYREALEDIVGHLQSQLS 143

  Fly   160 RPVNTPEEICQVATISA-NGDKSVGNLISEAIKKVGRDGVITV---KDGKTLCD----------- 209
            ..::..::......:.| .|.|.:|.. |:...|:..|.|.||   ::|:...|           
  Fly   144 IQLDVKDKAKMADVVKACVGTKFIGKW-SDLAVKIALDAVETVTLSENGRLEVDIKRYAKVEKIP 207

  Fly   210 -----ELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALELANAQRK 269
                 |..|::|:..::....|......:..::     :||.|..:.|...|           :.
  Fly   208 GGAIEESCVLKGVMINKDVTHPKMRRLIENPRI-----VLLDCSLEYKKGES-----------QT 256

  Fly   270 PLVIIAE-------DLEAEALSTLVVNRLKVGLQVCAVK------APGFGDNRKENLMDMAVATG 321
            .:.||.|       .:|.|.:.       ::...:.|||      ..|..|..:..|:       
  Fly   257 NVEIIGEQDFTRMLQIEEEFVQ-------RICADIIAVKPDLVFTEKGVSDLAQHYLL------- 307

  Fly   322 GIVFGDEANMVRLEDIKMSDFGRV----GEVVVSKDDTMLLKGKGQKA---EVEKRVEGLREAIK 379
                  :|.:..:..::.:|..|:    |..:|::.:.:..|..|..|   ||:|        |.
  Fly   308 ------KAGITAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKK--------IG 358

  Fly   380 ESTSSYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAV-EEGIVPGGGTA 443
            :...::..|..:.:...:     ||| |.|.|: ::|.:..:.|||:..|..| |..:|.|||..
  Fly   359 DEYFTFVTECKEPKACTI-----LLR-GASKDI-LNETERNLQDALHVARNLVLEPRLVAGGGAV 416

  Fly   444 LLRCIQKL--NDLKGANEDQNMGIEIIRRALRMPC-------LTI--AKNAGVDGAMVVAKVEIL 497
            .:...|.|  ..:||........:|||.|.|...|       ||.  ||:|...|..|.|     
  Fly   417 EMAASQLLTRKQVKGPYTAVAHALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCA----- 476

  Fly   498 DGDYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTTAEAVVT 547
               :|.|...||..:|..:.|.:|..|.......|...|.||...:.:|:
  Fly   477 ---WGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVS 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 130/570 (23%)
GroEL 28..548 CDD:239460 130/570 (23%)
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 130/570 (23%)
TCP1_gamma 7..524 CDD:239453 130/570 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453467
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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