DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60C and Hsp60D

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster


Alignment Length:530 Identity:235/530 - (44%)
Similarity:354/530 - (66%) Gaps:8/530 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RNYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKD 88
            |.:|.|:|||.|.|.:::|||:|||:|||.|:|||||||:|||...||:|||||:|||.::.|.:
  Fly    14 RTFANDIRFGAEARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISPRITKDGITVANNVQLGN 78

  Fly    89 KFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVE-IRRGVMLAIETVK 152
            :.|::|.:|::...||||.:.||||||||:|||.||.:|...:.:....|: :|.|::.....|.
  Fly    79 RRQDMGVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVC 143

  Fly   153 DNLRRLSRPVNTPEEICQVATISANGDKSVGNLISEAIKKVGRDGVITVKDGKTLCDELEVIEGM 217
            |.|..:|:.|:|..::..||.::.|||:.:..||.:.|.::|..|||.:|:..:..||.::.||:
  Fly   144 DALGEMSQSVDTIGQVEAVAKVALNGDERLAELIGDIILELGDSGVILLKESHSPFDEAKIQEGI 208

  Fly   218 KFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALELANAQRKPLVIIAEDLEAEA 282
            ....||.||:|...|.  .:|.::.|||....||.....|:||||||..:.:||:|||::..::.
  Fly   209 TIASGYYSPFFAKQSH--TLELENCLLLLTLAKIDQVEQILPALELARLKERPLLIIAKNFGSDL 271

  Fly   283 LSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVFGDEANMVRLEDIKMSDFGRVGE 347
            |..||:|.|:..:||||||||.|||.:.|.:.|:|.||||.:..|.::   |.|:...|.|.|.|
  Fly   272 LKILVLNNLQGRVQVCAVKAPSFGDEQCEEMEDIAFATGGHLLEDASS---LADLSEEDLGEVME 333

  Fly   348 VVVSKDDTMLLKG-KGQKAEVEKRVEGLREAIKESTSSYEKEKMQERLARLSSGVALLRVGGSSD 411
            .||...:|.||:. ...:.:|:.|::.:||.|.|:.:..|.::::.||.||...:|.:.|||:|:
  Fly   334 AVVDAKETHLLQPINVNEEQVQCRIQDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSE 398

  Fly   412 VEVSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCIQKLNDLKGAN-EDQNMGIEIIRRALRMP 475
            :||||:|||..|||:|.|.|:.:|:|||||||.||||..|::|...: .:..:|.||::.|||:|
  Fly   399 LEVSERKDRFNDALHAVRVAISDGVVPGGGTAYLRCIPVLDELPPTDIMELQVGREIVKDALRLP 463

  Fly   476 CLTIAKNAGVDGAMVVAKVEILDGDYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLT 540
            |.|||:|||||...|:.:|....|:|||||..||:|:::.|||:|||||:::|::.|||:||||.
  Fly   464 CYTIARNAGVDPNEVLRRVLKGSGNYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLA 528

  Fly   541 TAEAVVTELP 550
            |.|.::|:.|
  Fly   529 TTEVLITKQP 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 235/530 (44%)
GroEL 28..548 CDD:239460 231/522 (44%)
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 235/530 (44%)
GroEL 18..536 CDD:239460 231/522 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449862
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S222
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183447at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45633
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.800

Return to query results.
Submit another query.