DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60C and CCT6

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster


Alignment Length:602 Identity:118/602 - (19%)
Similarity:221/602 - (36%) Gaps:160/602 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKD-KFQNIGAKLVQDV 101
            |:.:.....|.|.:...:||||...::....|..||||||     ::.|.: :.|:..|.::...
  Fly    21 AINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDG-----NVLLHEMQIQHPTASMIARA 80

  Fly   102 ANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAIETVKDNLRRLSRPVNTPE 166
            :...::..||||||..:|...:.|:....:|.|..|..:..|    .|..:|....:...|..|.
  Fly    81 STAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDG----FEKARDKALEVLDQVKVPV 141

  Fly   167 EI-----CQVATISANGDKSVGNLISEAIKKVGRDGVITVKDG-KTLCDELEVIE---------- 215
            ||     .:||..|..  ..|...:::.:..|..:.|:|:... ||...:|.::|          
  Fly   142 EINKKNLVEVANTSLK--TKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMVELMEMQHKSDT 204

  Fly   216 ------GMKFDRG-------------YI---------------SPYFINTSKGAKVEFQDALLLF 246
                  |:..|.|             ||               |.:|..|:: .:..|..|...|
  Fly   205 DTQLVRGLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAE-EREAFVRAEREF 268

  Fly   247 CEKKIKSAPSIVPALEL----ANAQRKPLVII----AEDLEAEALS---TLVVNRLKVGLQVCAV 300
            .::::|.      .:||    .:...|..|:|    .:.:..:||:   .|.:.|.|        
  Fly   269 IDQRVKK------VIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAK-------- 319

  Fly   301 KAPGFGDNRKENLMDMAVATGGIVFGDEANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQKA 365
                     :.|:..:::|.||..      |...:|::....|..|.|                 
  Fly   320 ---------RRNMERLSLACGGTA------MNSFDDLQEEHLGYAGVV----------------- 352

  Fly   366 EVEKRVEGLREAIKESTSSYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRA 430
                    ....:.|:..::.::      .:....|.:| :.|.:...:::.||.:.|.|.|...
  Fly   353 --------YEHVLGENKYTFVED------CKNPLSVTIL-IKGPNKHTITQIKDAIRDGLRAINN 402

  Fly   431 AV-EEGIVPGGGTALLRCIQKL----NDLKGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMV 490
            .: ::.:|||.|...:|...:|    :.:||.:   .:.::....||.:...|:|.|:|.|....
  Fly   403 TIADKALVPGAGAFEVRAYNELVAFKDTIKGKS---RLAVQAFADALLVIPKTLAVNSGYDAQDT 464

  Fly   491 VAKVEILD----GDYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTTAEAVVTELPL 551
            :.|:.:.|    ...|.|...||....::.|:.|...|.:..::..:.:||.|...:.|:     
  Fly   465 IVKLTVEDRLSPELVGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVM----- 524

  Fly   552 EEAAAAGAAAGLGALGG 568
                    .||:.:|.|
  Fly   525 --------RAGMTSLKG 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 114/585 (19%)
GroEL 28..548 CDD:239460 114/580 (20%)
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 116/599 (19%)
TCP1_zeta 7..528 CDD:239458 115/595 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453449
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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