DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60C and cct5

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_997778.1 Gene:cct5 / 322258 ZFINID:ZDB-GENE-030131-977 Length:541 Species:Danio rerio


Alignment Length:568 Identity:124/568 - (21%)
Similarity:234/568 - (41%) Gaps:122/568 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SHVLWARNYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAK 82
            ||:|.|:                     .:|:.:..::||.|.:.::....|...:|.||.|:  
Zfish    36 SHILAAK---------------------AVANTLRTSLGPNGLDKMMVDKDGEVTVTNDGATI-- 77

  Fly    83 SIALKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLA 147
             :::.|....| |||:.:::.:.::|.|||||...|||.|:.::..:.:.||..|:.|..|...|
Zfish    78 -LSMMDVDHQI-AKLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEQLLDRGIHPIRIADGYDQA 140

  Fly   148 IETVKDNLRRL--SRPV--NTPEEICQVATISANGDKSVGNLISEAIKKVGRDGVITVKD----- 203
            .:...:.|.::  |.||  |..|.:.|.| ::..|.|.: |.....:.::..:.::||.|     
Zfish   141 AKIAIEQLDKIGDSFPVDPNNTESLVQTA-MTTLGSKVI-NRCHRQMAEIAVNAILTVADMERKD 203

  Fly   204 ---------GKT--LCDELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLL--FCEKKIKSAP 255
                     ||.  ..::.::|:|:..|:.:..|......|..|:    |:|.  |...|.|:..
Zfish   204 VDFELIKVEGKVGGKLEDTQLIKGVIVDKEFSHPQMPKVLKDTKI----AILTCPFEPPKPKTKH 264

  Fly   256 SI-VPALELANAQRKPLVIIAEDLEAEALSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVA 319
            .: |.::|...|.:|        .|.:....::       .||            |||..::|:.
Zfish   265 KLDVTSVEDYKALQK--------YEKDKFQEMI-------RQV------------KENGANLAIC 302

  Fly   320 TGGIVFGDEANMVRLE------------DIKMSDFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVE 372
            ..|  |.||||.:.|:            :|::......|.:|            .:..|:.....
Zfish   303 QWG--FDDEANHLLLQNELPAIRWVGGPEIELIAIATGGRIV------------PRFCELTPEKL 353

  Fly   373 GLREAIKESTSSYEKEKM---QERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEE 434
            |....:||......|::|   :|  .:.|..|.:...||:..: :.|.|..:.|||...|..|.:
Zfish   354 GTAGLVKEICFGTTKDRMLVIEE--CKNSRAVTIFIRGGNKMI-IEEAKRALHDALCVIRNLVRD 415

  Fly   435 G-IVPGGGTALLRCIQKLNDL--KGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKV-- 494
            . ||.|||.:.:.|...:|:.  |..:.:| ..:.....||.:..:.:|:|:|::....:.:|  
Zfish   416 NRIVYGGGASEIACALAVNEAADKCPSLEQ-YAMRAFADALEVIPMALAENSGLNPIQTMTEVRA 479

  Fly   495 -EILDGD--YGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLL 539
             ::.:.:  .|.|.|.....:|.::.:|:.....:..||.|..|..::
Zfish   480 RQVKENNSALGIDCLHLSTNDMKQQHVIETLIGKKQQISLATQVVKMI 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 121/563 (21%)
GroEL 28..548 CDD:239460 120/558 (22%)
cct5NP_997778.1 TCP1_epsilon 10..535 CDD:239455 124/568 (22%)
Cpn60_TCP1 44..533 CDD:278544 120/539 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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