DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and Hsp60A

DIOPT Version :10

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster


Alignment Length:573 Identity:465/573 - (81%)
Similarity:523/573 - (91%) Gaps:4/573 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MFRYTNTLQRTAKISHVLWARNYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSW 68
            |||...:|.|:: ||..|..|.|||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MFRLPVSLARSS-ISRQLAMRGYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSW 64

  Fly    69 GSPKITKDGVTVAKSIALKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISR 133
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||:
  Fly    65 GSPKITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISK 129

  Fly   134 GASPVEIRRGVMLAIETVKDNLRRLSRPVNTPEEICQVATISANGDKSVGNLISEAIKKVGRDGV 198
            ||:|||||||||||:|||||||:.:||||:|||||.||||||||||:::|||||||:||||||||
  Fly   130 GANPVEIRRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEAMKKVGRDGV 194

  Fly   199 ITVKDGKTLCDELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALEL 263
            |||||||||.||||||||||||||||||||||:||||||||||||||..||||.|..||:|||||
  Fly   195 ITVKDGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKISSVQSIIPALEL 259

  Fly   264 ANAQRKPLVIIAEDLEAEALSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVFGDE 328
            ||||||||||||||::.||||||||||||:||||.||||||||||||..|.|||:|:|||||||:
  Fly   260 ANAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVFGDD 324

  Fly   329 ANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVEGLREAIKESTSSYEKEKMQER 393
            |::|:|||:|:||.|:|||||::||||:||||||:|.:|.:|...:::.|:::||.|||||:|||
  Fly   325 ADLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVLRRANQIKDQIEDTTSEYEKEKLQER 389

  Fly   394 LARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCIQKLNDLKGAN 458
            ||||:||||||||||||:|||:||||||.||||||||||||||||||||||||||:||..::..|
  Fly   390 LARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLEGVETTN 454

  Fly   459 EDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKVEILDGDYGYDALKGEYGNMIERGIIDPTK 523
            |||.:|:||:||||||||:||||||||||||||||||...||||||||||||||:||:|||||||
  Fly   455 EDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKVENQAGDYGYDALKGEYGNLIEKGIIDPTK 519

  Fly   524 VVRTAISDAAGVASLLTTAEAVVTELPLEEAAAAGAAAGLGALGGM-GMGGMG 575
            ||||||:||:|||||||||||||||:|.|:.|.  |..|:|.:||| ||||||
  Fly   520 VVRTAITDASGVASLLTTAEAVVTEIPKEDGAP--AMPGMGGMGGMGGMGGMG 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 GroEL 28..548 CDD:239460 437/519 (84%)
Hsp60ANP_511115.2 GroEL 24..544 CDD:239460 437/519 (84%)

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