DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and CCT2

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster


Alignment Length:569 Identity:137/569 - (24%)
Similarity:232/569 - (40%) Gaps:134/569 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GVDVLADAVAVTMGPKGRNVII---EQSWGSPKITKDGVTVAKSIALKDKFQNIGAKLVQDVANN 104
            |...:.|.|..|:||||.:.|:   .::.|..::|.||.|:.:::.:    .|..||::.|::..
  Fly    30 GAIAIGDLVKSTLGPKGMDKILVATGRNAGHVEVTNDGATILRAVGV----DNPAAKILVDMSRV 90

  Fly   105 TNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEI----RRGVMLAIETV-------------- 151
            .:||.|||||:.||||..:.:|..:.:.:...|..|    |:...:|:|.:              
  Fly    91 QDEEVGDGTTSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQVALEALTAAAQDNSSSDEKF 155

  Fly   152 KDNLRRLSRPVNTPEEICQVATISANGDKSVGNLISEAIKKVGRDG-----VITVKDGKTLCDEL 211
            :::|..::|...:.:.:.|.....|       ||..:|:.::...|     .|..|.|.||.|..
  Fly   156 RNDLLNIARTTLSSKILHQHKDFFA-------NLAVDAVMRLKGSGELKSIQIIKKSGGTLGDSF 213

  Fly   212 EVIEGMKFDR--GYISPYFINTSKGAKVEFQDALLLFCE-----KKIKSAPSIVPALELANAQRK 269
             :.||...|:  |...|..|          ::|.:|...     .|||...|.:....||.    
  Fly   214 -LDEGFLLDKKPGVHQPQRI----------ENARILIANTPMDTDKIKVFGSSIKVDSLAK---- 263

  Fly   270 PLVIIAEDLEAEALSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVFGDEANMVRL 334
              :...|..|.|.:...|...||....|...:...:  |..|.|           |.|    .|:
  Fly   264 --IADLEMAEKEKMKEKVDKILKHKCNVFINRQLIY--NYPEQL-----------FAD----ARV 309

  Fly   335 EDIKMSDFGRV--------GEVVVSKDDTMLLKGKGQKAEVEKRVEGLREAIKESTSSYEKEKMQ 391
            ..|:.:||..:        ||:|.:.::..|:| .|:...:|:.:.|                 :
  Fly   310 MSIEHADFDGIERLAYCTGGEIVSTFENPSLVK-LGECDVIEQVMIG-----------------E 356

  Fly   392 ERLARLSSGVAL-----LRVGGSSDVEVSEKKDRVI-DALNATRAAVEEG-IVPGGG-------T 442
            :.|.|. |||.|     :.:.|::. ::.::.||.: |||....|.|:|. |:.|||       |
  Fly   357 DTLLRF-SGVKLGEACTIVIRGATQ-QILDEADRSLHDALCVLAATVKESRIIFGGGCSEALMAT 419

  Fly   443 ALLRCIQKLNDLKGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKVEILDG------DY 501
            |:|:   |..:..|   .:.:.||...|||......||.|||.|.|.:|:  |:..|      ..
  Fly   420 AVLK---KAAETPG---KEAIAIEAFARALLSLPTAIADNAGYDSAQLVS--ELRAGHAQGKQTL 476

  Fly   502 GYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTTAEAVVTELP 550
            |.|...|:..::.|.||.:...|.|..:..|:..|.::...:.::...|
  Fly   477 GLDMELGKVADVRELGITESFAVKRQVLMSASEAAEMILRVDNIIRCAP 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 137/569 (24%)
GroEL 28..548 CDD:239460 136/565 (24%)
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 137/569 (24%)
TCP1_beta 10..527 CDD:239452 137/569 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453441
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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