DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and mcp60

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_592894.1 Gene:mcp60 / 2543131 PomBaseID:SPAC12G12.04 Length:582 Species:Schizosaccharomyces pombe


Alignment Length:553 Identity:296/553 - (53%)
Similarity:411/553 - (74%) Gaps:7/553 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RNYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKD 88
            |.||||::||.:.||.:|.|||.||.||:||:|||||||:|:|.:|||||||||||||:|::|||
pombe    31 RTYAKDLKFGVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKD 95

  Fly    89 KFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAIETVKD 153
            ||:|:||:||||||:.|||.|||||||||||.|||..|....::.|.:|:::|||:.||::.|.:
pombe    96 KFENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVE 160

  Fly   154 NLRRLSRPVNTPEEICQVATISANGDKSVGNLISEAIKKVGRDGVITVKDGKTLCDELEVIEGMK 218
            .|:...|.:.|.|||.||||||||||..:|.|:::|:::||::||||||:|:|:.|||||.||||
pombe   161 FLQANKRDITTSEEISQVATISANGDTHIGELLAKAMERVGKEGVITVKEGRTISDELEVTEGMK 225

  Fly   219 FDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALELANAQRKPLVIIAEDLEAEAL 283
            |||||||||||...|..||||::.|:|..|||:.:...|:|:||||..||:||||||||::.|||
pombe   226 FDRGYISPYFITDVKSQKVEFENPLILLSEKKVSAVQDILPSLELAAQQRRPLVIIAEDVDGEAL 290

  Fly   284 STLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVFGDEANMVRLEDIKMSDFGRVGEV 348
            :..::|:|:..|||.|:|||||||||:..|.|:||.|...||.||.: |.:|..:....|..|.|
pombe   291 AACILNKLRGQLQVVAIKAPGFGDNRRNMLGDLAVLTDSAVFNDEID-VSIEKAQPHHLGSCGSV 354

  Fly   349 VVSKDDTMLLKGKGQKAEVEKRVEGLREAIKE-STSSYEKEKMQERLARLSSGVALLRVGGSSDV 412
            .|:|:||:::||.|...:|..|.|.:|..:.: :.:.|||||:|||||:||.|:|:::|||||:|
pombe   355 TVTKEDTIIMKGAGDHVKVNDRCEQIRGVMADPNLTEYEKEKLQERLAKLSGGIAVIKVGGSSEV 419

  Fly   413 EVSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCIQKLNDLKGANEDQNMGIEIIRRALRMPCL 477
            ||:|||||::|||||.:|||.||::||.||:.::...:|.|:...|.||.:|:||:|:|:..|..
pombe   420 EVNEKKDRIVDALNAVKAAVSEGVLPGAGTSFVKASLRLGDIPTNNFDQKLGVEIVRKAITRPAQ 484

  Fly   478 TIAKNAGVDGAMVVAKVEILDG---DYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLL 539
            ||.:|||::|.::|.|::.|.|   :.|||..|..:.::.|.|::||.|||||.:.||:|||||:
pombe   485 TILENAGLEGNLIVGKLKELYGKEFNIGYDIAKDRFVDLNEIGVLDPLKVVRTGLVDASGVASLM 549

  Fly   540 TTAEAVVTELPLEEAAAAGAAAGLGALGGM-GM 571
            .|.|..:.:.|.|..|.|| ..|:|.:||| ||
pombe   550 GTTECAIVDAPEESKAPAG-PPGMGGMGGMPGM 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 285/532 (54%)
GroEL 28..548 CDD:239460 281/523 (54%)
mcp60NP_592894.1 PTZ00114 29..564 CDD:185455 286/533 (54%)
GroEL 35..558 CDD:239460 281/523 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 571 1.000 Domainoid score I35
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 631 1.000 Inparanoid score I139
OMA 1 1.010 - - QHG61846
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 1 1.000 - - otm47177
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1504
TreeFam 1 0.960 - -
1211.830

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