DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60C and cct3

DIOPT Version :9

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_775357.1 Gene:cct3 / 192327 ZFINID:ZDB-GENE-020419-5 Length:543 Species:Danio rerio


Alignment Length:552 Identity:105/552 - (19%)
Similarity:216/552 - (39%) Gaps:83/552 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKL 97
            |.:|:...:.....:||.:...:||:....::....|...:|.||..:.:.|    :.|:..||.
Zfish    18 GRKVQIGNISAAKTIADIIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREI----QVQHPAAKS 78

  Fly    98 VQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAIETVKDNLRRLSRPV 162
            :.:::...:||.|||||:..:||..:.....:.:.:...|..:......|::.:.:.|:.:|.||
Zfish    79 MIEISRTQDEEVGDGTTSVIILAGEMLSVAEQFLEQQMHPTVVIGAYRQALDDMLNILKDISTPV 143

  Fly   163 NTPEEICQVATI-SANGDKSVG-------NLISEAIKKV-----GRDGVITVKDGKT------LC 208
            :.......:..| ||...|::.       |:..:|::.|     ||:.:...|..|.      :.
Zfish   144 DVSNRDMMLKIINSAINTKALSRWSTLACNIALDAVRTVELDENGREEIDIKKYAKVEKVPGGII 208

  Fly   209 DELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALELANAQRKPLVI 273
            ::..|:.|:..::....|......|..::     :||.|..:.|...|... :|:|..:....::
Zfish   209 EDSCVLRGVMVNKDVTHPRMRRLIKNPRI-----VLLDCSLEYKKGESQTD-IEIAREEDFARIL 267

  Fly   274 IAEDLEAEALSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVFGDEANMVRLEDIK 338
            ..|:...:.:...:: |||..|   .....|..|..:..||             :||:..:..|:
Zfish   268 QMEEEYVQQICEDII-RLKPDL---IFTEKGISDLAQHYLM-------------KANITAIRRIR 315

  Fly   339 MSDFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVEGLRE-AIKESTSSYEKEKMQERL------AR 396
            .:|..|:              .:...|.:..|.:.|.| .:...|..:|.:|:.:..      .:
Zfish   316 KTDNNRI--------------ARACGARIASRTDELTENDVGTGTGLFEVKKIGDEYFTFVTECK 366

  Fly   397 LSSGVALLRVGGSSDVEVSEKKDRVIDALNATR-AAVEEGIVPGGGTALLRCIQKLNDLKGANED 460
            ......:|..|.|.:: ::|.:..:.||:...| ..::..::||||...:....:|.:...|   
Zfish   367 DPKACTILLRGASKEI-LAEVERNLQDAMQVCRNVLLDPYLLPGGGAVEMEVSHRLTERSRA--- 427

  Fly   461 QNMGIE-----IIRRALRMPCLTIAKNAGVDGAMVVAKVEIL-----DGDYGYDALKGEYGNMIE 515
             ..|:|     .:.:||.:...|:.:|.|.....|:..:...     :..:|.:...|...:|.:
Zfish   428 -MTGVEQWPYRAVAQALEVVPRTLIQNCGASAIRVLTSLRAKHTQEGNSSWGVNGETGTLADMEQ 491

  Fly   516 RGIIDPTKVVRTAISDAAGVASLLTTAEAVVT 547
            .||.:|..|.......|...|.||...:.:|:
Zfish   492 LGIWEPLAVKAQTYKTAVETAILLLRIDDIVS 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 105/552 (19%)
GroEL 28..548 CDD:239460 105/552 (19%)
cct3NP_775357.1 chap_CCT_gamma 5..528 CDD:274085 105/552 (19%)
TCP1_gamma 5..524 CDD:239453 105/552 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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