DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60C and Hspd1

DIOPT Version :10

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_034607.3 Gene:Hspd1 / 15510 MGIID:96242 Length:573 Species:Mus musculus


Alignment Length:575 Identity:414/575 - (72%)
Similarity:483/575 - (84%) Gaps:9/575 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MFRYTNTLQRTAKISHVL---WARNYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIE 65
            |.|....|::...:|..|   ..|.|||||:||.:.||:||||||:||||||||||||||.||||
Mouse     1 MLRLPTVLRQMRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIE 65

  Fly    66 QSWGSPKITKDGVTVAKSIALKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEK 130
            |||||||:|||||||||||.||||::||||||||||||||||||||||||||||||:||||||||
Mouse    66 QSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEK 130

  Fly   131 ISRGASPVEIRRGVMLAIETVKDNLRRLSRPVNTPEEICQVATISANGDKSVGNLISEAIKKVGR 195
            ||:||:|||||||||||::.|...|::.|:||.|||||.|||||||||||.:||:||:|:|||||
Mouse   131 ISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDKDIGNIISDAMKKVGR 195

  Fly   196 DGVITVKDGKTLCDELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPA 260
            .|||||||||||.||||:|||||||||||||||||||||.|.|||||.:|..||||.|..|||||
Mouse   196 KGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSVQSIVPA 260

  Fly   261 LELANAQRKPLVIIAEDLEAEALSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVF 325
            ||:|||.||||||||||::.|||||||:|||||||||.||||||||||||..|.|||:||||.||
Mouse   261 LEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIATGGAVF 325

  Fly   326 GDEANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVEGLREAIKESTSSYEKEKM 390
            |:|...:.|||::..|.|:||||:|:|||.|||||||.||.:|||::.:.|.:..:||.|||||:
Mouse   326 GEEGLNLNLEDVQAHDLGKVGEVIVTKDDAMLLKGKGDKAHIEKRIQEITEQLDITTSEYEKEKL 390

  Fly   391 QERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCIQKLNDLK 455
            .||||:||.|||:|:|||:|||||:||||||.|||||||||||||||.|||.||||||..|:.||
Mouse   391 NERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLK 455

  Fly   456 GANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKVEILDGDYGYDALKGEYGNMIERGIID 520
            .|||||.:|||||:|||::|.:||||||||:|:::|.|:.....:.||||:.|::.||:|:||||
Mouse   456 PANEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKILQSSSEVGYDAMLGDFVNMVEKGIID 520

  Fly   521 PTKVVRTAISDAAGVASLLTTAEAVVTELPLEEAAAAGAAAGLGALGGMGMGGMG 575
            ||||||||:.||||||||||||||||||:|.||     ...|:||:|||| ||||
Mouse   521 PTKVVRTALLDAAGVASLLTTAEAVVTEIPKEE-----KDPGMGAMGGMG-GGMG 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 GroEL 28..548 CDD:239460 390/519 (75%)
Hspd1NP_034607.3 GroEL 28..548 CDD:239460 390/519 (75%)

Return to query results.
Submit another query.