DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and LOC1278824

DIOPT Version :10

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_318461.2 Gene:LOC1278824 / 1278824 VectorBaseID:AGAMI1_000628 Length:573 Species:Anopheles gambiae


Alignment Length:573 Identity:445/573 - (77%)
Similarity:511/573 - (89%) Gaps:4/573 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MFRYTNTLQRTAKISHVLWARNYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSW 68
            |||.. |:.|.|....|..:|.|||||||||||||:||||||||||||||||||||||||:||||
Mosquito     1 MFRLP-TVLRVAAARQVAASRGYAKDVRFGPEVRALMLQGVDVLADAVAVTMGPKGRNVILEQSW 64

  Fly    69 GSPKITKDGVTVAKSIALKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISR 133
            ||||||||||||||.|.||.||||||||||||||||||||||||||||||||||||||||||||:
Mosquito    65 GSPKITKDGVTVAKGIELKCKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISK 129

  Fly   134 GASPVEIRRGVMLAIETVKDNLRRLSRPVNTPEEICQVATISANGDKSVGNLISEAIKKVGRDGV 198
            ||:|||||||||||::|||::|:.|||.|||||||.||||||||||:::|:|||||:|:||::||
Mosquito   130 GANPVEIRRGVMLAVDTVKEHLKTLSRKVNTPEEIAQVATISANGDRAIGDLISEAMKRVGKEGV 194

  Fly   199 ITVKDGKTLCDELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALEL 263
            |||||||||.||||||||||||||||||||||:||||||||||||:||.||||.:..||:||||:
Mosquito   195 ITVKDGKTLNDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALVLFSEKKISTVQSIIPALEM 259

  Fly   264 ANAQRKPLVIIAEDLEAEALSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVFGDE 328
            ||.|||||||||||::.||||||||||||:||||.||||||||||||..|.|||::||||||||:
Mosquito   260 ANQQRKPLVIIAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLSDMAISTGGIVFGDD 324

  Fly   329 ANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVEGLREAIKESTSSYEKEKMQER 393
            ||:|:|||:::||.|:|||:.::|||.:||||:|::.:|.:|.:.:|:.|.|:||.|||||:|||
Mosquito   325 ANLVKLEDVQLSDLGQVGEITITKDDCLLLKGRGKQEDVNRRADQIRDQIAETTSEYEKEKLQER 389

  Fly   394 LARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCIQKLNDLKGAN 458
            |||||||||:|:|||||:|||:||||||.|||.||||||||||||||||||:||...|.:|||||
Mosquito   390 LARLSSGVAVLKVGGSSEVEVNEKKDRVNDALCATRAAVEEGIVPGGGTALIRCAPALANLKGAN 454

  Fly   459 EDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKVEILDGDYGYDALKGEYGNMIERGIIDPTK 523
            ||||.||||:||||||||..|||||||||::||||||.|.||:|||||..||.||||:|||||||
Mosquito   455 EDQNTGIEIVRRALRMPCTQIAKNAGVDGSVVVAKVEELKGDFGYDALNNEYVNMIEKGIIDPTK 519

  Fly   524 VVRTAISDAAGVASLLTTAEAVVTELPLEEAAAAGAAAGLGALGGM-GMGGMG 575
            |||||:|||:|||||||||||||||:|.||  .||...|:|.:||| ||||||
Mosquito   520 VVRTALSDASGVASLLTTAEAVVTEIPKEE--PAGPMGGMGGMGGMGGMGGMG 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 GroEL 28..548 CDD:239460 417/519 (80%)
LOC1278824XP_318461.2 GroEL 24..544 CDD:239460 417/519 (80%)

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