DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-theta and DIP-epsilon

DIOPT Version :10

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster


Alignment Length:436 Identity:186/436 - (42%)
Similarity:245/436 - (56%) Gaps:59/436 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 TVVNAIPEKDLPKFGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNH 183
            |:.|.|.|.  |:|.::::|:|||..|...|.|.|.||.:||:||:..:...|||:.|||||:|.
  Fly    43 TLNNVISED--PEFTDVIENITVPAGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHVITRNP 105

  Fly   184 RMSIT---HAEKRAWILRIRDVKESDKGWYMCQINTDPMKSQVGYLDVVVPPDILDYPTSTDMVI 245
            |:|:|   |.:.|.|.|.|.:|:|.|:|.|||||||...|:|.|::.|||||:|.|..||:|:::
  Fly   106 RISVTHDKHDKHRTWFLHINNVQEEDRGRYMCQINTVTAKTQYGFVKVVVPPNIDDALTSSDIIV 170

  Fly   246 REGSNVTLKCAATGSPTPTITWRREGGELIPLPNGAEAVAYNGSFLTIAKVNRLNMGAYLCIASN 310
            |||.||||:|.|.|||.|||.|:|:.|..|.:....|........|.:.:::||:||||||||||
  Fly   171 REGDNVTLRCKAKGSPEPTIKWKRDDGNKIVINKTLEVHDLETDSLELERISRLHMGAYLCIASN 235

  Fly   311 GIPPTVSKRVMLIVHFPPMIWIQNQLVGAALTQNITLECQSEAYPKSINYWMK-NDTIIVPGERF 374
            |:||:||||:.:.|.|.||:||.:||||..:..||||||..||.|.|:|||.: ||.:|....::
  Fly   236 GVPPSVSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANPTSLNYWTRENDQMITESSKY 300

  Fly   375 VPETF--ESGYKITMRLTIYEVDIQDFGAYRCVAKNSLGDTDGAIKLY-HIPQTT----TMTTMA 432
            ..||.  ...||.||||||..|...|:|.|:|||||..||.||.|||| ..|.||    |.||:.
  Fly   301 KTETIPGHPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSPPTTQPPPTTTTLR 365

  Fly   433 PTVSINTVPVVLVKYNKEQRYGSSQNSNTNPYNFN----PGNSQQNTKLQRGKSNSK-------- 485
            .|.: ....:.|..|           .|| |.|.|    .|....|:.:..|||:.|        
  Fly   366 RTTT-TAAEIALDGY-----------INT-PLNGNGIGIVGEGPTNSVIASGKSSIKYLSNLNEI 417

  Fly   486 --------GSDQSPSGLNNVFVGATSSLWNSQDHHSSSSSSSSASS 523
                    ||  ||.|.:          | |:...|.|..:..|||
  Fly   418 DKSKQKLTGS--SPKGFD----------W-SKGKSSGSHGNLMASS 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 46/95 (48%)
Ig strand B 147..151 CDD:409353 1/3 (33%)
Ig strand C 160..164 CDD:409353 2/3 (67%)
Ig strand E 195..199 CDD:409353 2/3 (67%)
Ig strand F 209..214 CDD:409353 3/4 (75%)
Ig strand G 221..224 CDD:409353 1/2 (50%)
Ig 232..324 CDD:472250 46/91 (51%)
Ig strand B 251..255 CDD:409275 3/3 (100%)
Ig strand C 264..268 CDD:409275 2/3 (67%)
Ig strand E 289..293 CDD:409275 1/3 (33%)
Ig strand F 303..308 CDD:409275 4/4 (100%)
Ig strand G 317..320 CDD:409275 2/2 (100%)
Ig_3 327..408 CDD:464046 41/83 (49%)
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 46/95 (48%)
Ig strand B 69..73 CDD:409353 1/3 (33%)
Ig strand C 82..86 CDD:409353 2/3 (67%)
Ig strand E 117..124 CDD:409353 3/6 (50%)
Ig 157..249 CDD:472250 46/91 (51%)
Ig strand B 176..180 CDD:409289 3/3 (100%)
Ig strand C 189..193 CDD:409289 2/3 (67%)
Ig strand E 213..218 CDD:409289 1/4 (25%)
Ig strand F 228..233 CDD:409289 4/4 (100%)
Ig strand G 242..245 CDD:409289 2/2 (100%)
IG_like 267..348 CDD:214653 41/80 (51%)
Ig strand C 283..287 CDD:409394 2/3 (67%)
Ig strand E 313..319 CDD:409394 4/5 (80%)
Ig strand F 329..334 CDD:409394 2/4 (50%)

Return to query results.
Submit another query.