DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and lsamp

DIOPT Version :10

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_073779341.1 Gene:lsamp / 664692 ZFINID:ZDB-GENE-090108-1 Length:363 Species:Danio rerio


Alignment Length:295 Identity:97/295 - (32%)
Similarity:141/295 - (47%) Gaps:41/295 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 NVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNHRMSITHAEKRAWILRIRDV 202
            |:|:......|::|.||: :..|:|||  :...|:.......:.:.|:.:....:..:.|||:.|
Zfish    66 NITIRQGDTTVIRCYVDD-KVSKVAWL--NRSNIIFAGEDKWSLDPRVELVTQGQLEYSLRIQKV 127

  Fly   203 KESDKGWYMCQINTDPMK--SQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLKCAATGSPTPTI 265
            ...|:|.|.|.|.|....  ||| ||.|.||..|  |..|.|:.:.|||||||.|.|.|.|.|.|
Zfish   128 DVFDEGPYTCSIQTKQQSKTSQV-YLIVQVPAII--YKVSEDITVNEGSNVTLTCLANGRPDPAI 189

  Fly   266 TWRREGGELIPLPNGAEAVAYNGSFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVMLIVHFPPMI 330
            |||.       |...|||:.. |.:|.|:.|.|...|.|.|.|||.:.....|.|.::|::||  
Zfish   190 TWRL-------LNPSAEALDV-GEYLEISGVVRSQAGRYECKASNDVSTPDVKYVNVVVNYPP-- 244

  Fly   331 WIQN-QLVGAALTQNITLECQSEAYPKSINYWMKND---------TIIVPGERFVPETFESGYKI 385
            :|:: :....|:.|...|.|::.|.|:....|.:::         ||.|.|.|.|          
Zfish   245 YIKDVRSSETAVGQAGVLHCEASAVPQPEFEWYRDERRLSSSQSLTIQVSGSRTV---------- 299

  Fly   386 TMRLTIYEVDIQDFGAYRCVAKNSLGDTDGAIKLY 420
               |.:..|..:|:|.|.|||.|.||..:.::.||
Zfish   300 ---LVVANVTEEDYGNYTCVATNRLGVHNASVFLY 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 28/93 (30%)
Ig strand B 147..151 CDD:409353 1/3 (33%)
Ig strand C 160..164 CDD:409353 2/3 (67%)
Ig strand E 195..199 CDD:409353 1/3 (33%)
Ig strand F 209..214 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 2/2 (100%)
Ig 232..324 CDD:472250 37/91 (41%)
Ig strand B 251..255 CDD:409275 3/3 (100%)
Ig strand C 264..268 CDD:409275 2/3 (67%)
Ig strand E 289..293 CDD:409275 1/3 (33%)
Ig strand F 303..308 CDD:409275 2/4 (50%)
Ig strand G 317..320 CDD:409275 1/2 (50%)
Ig_3 327..408 CDD:464046 24/90 (27%)
lsampXP_073779341.1 None

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