DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and Negr1

DIOPT Version :10

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_063138498.1 Gene:Negr1 / 59318 RGDID:708416 Length:423 Species:Rattus norvegicus


Alignment Length:316 Identity:98/316 - (31%)
Similarity:147/316 - (46%) Gaps:27/316 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 LQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNHRMSITHAEKRAWILRIR 200
            :.|:.|.....|||:|.::: ...|.|||  :..:|:.......:.:.|:||:...||.:.|:|:
  Rat    39 VDNMLVRKGDTAVLRCYLED-GASKGAWL--NRSSIIFAGGDKWSVDPRVSISTLNKRDYSLQIQ 100

  Fly   201 DVKESDKGWYMCQINTD--PMKSQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLKCAATGSPTP 263
            :|..:|.|.|.|.:.|.  |...|| :|.|.|||.|  |..|.||.|.||:||||.|.|||.|.|
  Rat   101 NVDVTDDGPYTCSVQTQHTPRTMQV-HLTVQVPPKI--YDISNDMTINEGTNVTLTCLATGKPEP 162

  Fly   264 TITWRREGGELIPLPNGAEAVAYNGSFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVMLIVHFPP 328
            .|:||.......|..        ||.:|.|..:.|...|.|.|.|.|.:.....|:|.::|:|.|
  Rat   163 AISWRHISPSAKPFE--------NGQYLDIYGITRDQAGEYECSAENDVSFPDVKKVRVVVNFAP 219

  Fly   329 MIWIQNQLVGAALT--QNITLECQSEAYPKSINYWMKNDTIIVPGERFVPETFESGYKITMRLTI 391
            .|   .::....:|  ::..:.|:....|.....|.|.:..:..|::.:   ....:.....||:
  Rat   220 TI---QEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKRLFNGQQGI---IIQNFSTRSILTV 278

  Fly   392 YEVDIQDFGAYRCVAKNSLGDTDGAIKLYHIPQTTTMTTMAPTVSINTVPVVLVKY 447
            ..|..:.||.|.|||.|.||.|:.::.|..|.:.   ||.:|..|....|....||
  Rat   279 TNVTQEHFGNYTCVAANKLGTTNASLPLNQIIEP---TTSSPVTSPGQYPHTFTKY 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 29/94 (31%)
Ig strand B 147..151 CDD:409353 3/3 (100%)
Ig strand C 160..164 CDD:409353 2/3 (67%)
Ig strand E 195..199 CDD:409353 1/3 (33%)
Ig strand F 209..214 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 1/2 (50%)
Ig 232..324 CDD:472250 35/91 (38%)
Ig strand B 251..255 CDD:409275 3/3 (100%)
Ig strand C 264..268 CDD:409275 1/3 (33%)
Ig strand E 289..293 CDD:409275 1/3 (33%)
Ig strand F 303..308 CDD:409275 2/4 (50%)
Ig strand G 317..320 CDD:409275 1/2 (50%)
Ig_3 327..408 CDD:464046 17/82 (21%)
Negr1XP_063138498.1 None

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