DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and hmcn1

DIOPT Version :10

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_073788814.1 Gene:hmcn1 / 559150 ZFINID:ZDB-GENE-041014-322 Length:5641 Species:Danio rerio


Alignment Length:324 Identity:88/324 - (27%)
Similarity:138/324 - (42%) Gaps:61/324 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 QNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQN-HVITKNHRMSITHAEKRAWILRIR 200
            :|::|.|....||.|....:....|.||: |.|.|.|..: .||:....:.:.||          
Zfish  2401 ENISVVVKNPVVLTCEASGMPPPAITWLK-DGQPISTSSSVRVISGGRGLRLMHA---------- 2454

  Fly   201 DVKESDKGWYMCQINTDPMKSQVGY-LDVVVPPDILDYPTSTDMVIREGSNVTLKCAATGSPTPT 264
              ..||.|.|.|.::....:.:..: |.|:|||.|::..|..|:.::|..|..|.|..||:|.|.
Zfish  2455 --ASSDAGRYTCIVSNSAGEERKNFDLYVLVPPSIVNEGTVEDVKVKERQNAILACEVTGNPVPE 2517

  Fly   265 ITWRREGGELIPLPNGAE-AVAYNGSFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVMLIVHFPP 328
            |||.::|.   ||.:... .|..||.||.|:.....:.|.|.|:|||    :...|..   ||..
Zfish  2518 ITWLKDGQ---PLASDTRLQVMSNGRFLQISASQVADTGRYSCLASN----SAGDRSR---HFNL 2572

  Fly   329 MIWIQNQLVGA-----------ALTQNITLECQSEAYPKSINYWMKNDTIIVPGERFVPETFESG 382
            .:.:...:.|:           .|....:|.|::::||.:|..|:|:.|           .|||.
Zfish  2573 NVLVSPTIAGSGPEGSAEEVTVTLNSPTSLVCEAQSYPPAIITWLKDGT-----------PFESS 2626

  Fly   383 YKITM-----RLTIYEVDIQDFGAYRCVAKNSLGDTDGAIKLYHIPQTTTMTTMAPTVSINTVP 441
            ..:.:     .|.|.....:|.|.|.|||.|..|:|   :|.|.:     ...:.|.::.|.:|
Zfish  2627 RNVRVLPGGRTLQILNAKEEDAGRYTCVATNEAGET---LKNYEV-----KVFVPPVINKNDIP 2682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 24/94 (26%)
Ig strand B 147..151 CDD:409353 2/3 (67%)
Ig strand C 160..164 CDD:409353 1/3 (33%)
Ig strand E 195..199 CDD:409353 0/3 (0%)
Ig strand F 209..214 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 0/2 (0%)
Ig 232..324 CDD:472250 31/92 (34%)
Ig strand B 251..255 CDD:409275 1/3 (33%)
Ig strand C 264..268 CDD:409275 2/3 (67%)
Ig strand E 289..293 CDD:409275 2/3 (67%)
Ig strand F 303..308 CDD:409275 2/4 (50%)
Ig strand G 317..320 CDD:409275 0/2 (0%)
Ig_3 327..408 CDD:464046 21/96 (22%)
hmcn1XP_073788814.1 None

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