DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-theta and NTM

DIOPT Version :9

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001338930.1 Gene:NTM / 50863 HGNCID:17941 Length:367 Species:Homo sapiens


Alignment Length:309 Identity:101/309 - (32%)
Similarity:160/309 - (51%) Gaps:33/309 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 FGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNHRMSITHAEKRAWI 196
            |.:.:.||||.....|.|:|.:||..| ::|||  :..|||...|.....:.|:.:....:..:.
Human    38 FPKAMDNVTVRQGESATLRCTIDNRVT-RVAWL--NRSTILYAGNDKWCLDPRVVLLSNTQTQYS 99

  Fly   197 LRIRDVKESDKGWYMCQINTD--PMKSQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLKCAATG 259
            :.|::|...|:|.|.|.:.||  |..|:| :|.|.|.|.|::  .|:|:.|.||:|::|.|.|||
Human   100 IEIQNVDVYDEGPYTCSVQTDNHPKTSRV-HLIVQVSPKIVE--ISSDISINEGNNISLTCIATG 161

  Fly   260 SPTPTITWRREGGELIPLPNGAEAVAY--NGSFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVML 322
            .|.||:|||    .:.|     :||.:  ...:|.|..:.|...|.|.|.|||.:...|.:||.:
Human   162 RPEPTVTWR----HISP-----KAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKV 217

  Fly   323 IVHFPPMIWIQNQLVGAALTQNITLECQSEAYPKSINYWMKNDTIIVPGERFVPETFESGYKITM 387
            .|::||.| .:.:..|..:.|..||:|::.|.|.:...|.|:|..::.|::        |.|:..
Human   218 TVNYPPYI-SEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRLIEGKK--------GVKVEN 273

  Fly   388 R-----LTIYEVDIQDFGAYRCVAKNSLGDTDGAIKLYHIPQTTTMTTM 431
            |     |..:.|...|:|.|.|||.|.||.|:.:|.|:.:.:.|:.|.:
Human   274 RPFLSKLIFFNVSEHDYGNYTCVASNKLGHTNASIMLFELNEPTSSTLL 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 31/94 (33%)
IG_like 137..230 CDD:214653 31/94 (33%)
IG_like 240..324 CDD:214653 32/85 (38%)
IGc2 247..310 CDD:197706 24/64 (38%)
Ig 327..419 CDD:299845 30/96 (31%)
IG_like 343..420 CDD:214653 26/81 (32%)
NTMNP_001338930.1 Ig 44..132 CDD:416386 30/91 (33%)
Ig strand A' 44..49 CDD:409353 4/4 (100%)
Ig strand B 51..59 CDD:409353 3/7 (43%)
CDR1 59..63 CDD:409353 2/3 (67%)
FR2 64..70 CDD:409353 4/8 (50%)
Ig strand C 64..70 CDD:409353 4/8 (50%)
CDR2 71..83 CDD:409353 4/11 (36%)
Ig strand C' 72..76 CDD:409353 2/3 (67%)
Ig strand C' 80..83 CDD:409353 0/2 (0%)
FR3 84..118 CDD:409353 7/33 (21%)
Ig strand D 87..94 CDD:409353 1/6 (17%)
Ig strand E 97..103 CDD:409353 0/5 (0%)
Ig strand F 110..118 CDD:409353 3/7 (43%)
CDR3 119..123 CDD:409353 2/3 (67%)
Ig strand G 123..132 CDD:409353 4/9 (44%)
FR4 125..132 CDD:409353 3/7 (43%)
Ig_3 136..205 CDD:404760 29/79 (37%)
Ig strand A' 142..147 CDD:409353 2/4 (50%)
Ig strand B 153..160 CDD:409353 2/6 (33%)
Ig strand C 166..171 CDD:409353 4/8 (50%)
Ig strand D 177..180 CDD:409353 1/2 (50%)
Ig strand E 184..190 CDD:409353 2/5 (40%)
Ig strand F 197..204 CDD:409353 3/6 (50%)
Ig strand G 211..219 CDD:409353 3/7 (43%)
Ig_3 222..299 CDD:404760 25/85 (29%)
putative Ig strand A 223..229 CDD:409353 2/6 (33%)
Ig strand B 239..243 CDD:409353 2/3 (67%)
Ig strand C 252..256 CDD:409353 0/3 (0%)
Ig strand E 278..282 CDD:409353 1/3 (33%)
Ig strand F 292..297 CDD:409353 2/4 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10656
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 141 1.000 Inparanoid score I4481
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - mtm8497
orthoMCL 1 0.900 - - OOG6_104123
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3058
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1110.800

Return to query results.
Submit another query.