DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and negr1

DIOPT Version :10

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_009300786.1 Gene:negr1 / 445374 ZFINID:ZDB-GENE-040822-27 Length:360 Species:Danio rerio


Alignment Length:306 Identity:100/306 - (32%)
Similarity:151/306 - (49%) Gaps:36/306 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 VSRE---AVLQC-VVDNLQTYKIAWLRVDTQTILTIQNHVITKNHRMSITH--AEKRAWILRIRD 201
            |||:   |:|:| ::|.:.  |.|||  :..:|:...|...:.:.|:||..  .:|..:.|:|:.
Zfish    48 VSRQGDTALLRCYLLDGIS--KGAWL--NRSSIIYAGNDKWSGDPRVSIVSNVGDKHEYSLQIQK 108

  Fly   202 VKESDKGWYMCQI----NTDPMKSQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLKCAATGSPT 262
            |..:|:|.|.|.|    |..|...|   |.|.|||.|  |..|:|:.:.|||||:|.|||:|.|.
Zfish   109 VDVTDEGVYTCSI
QSERNLHPKLIQ---LIVKVPPKI--YDISSDITVNEGSNVSLICAASGKPE 168

  Fly   263 PTITWRREGGELIPLPNGAEAVAYNGSFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVMLIVHFP 327
            |.|:||    .:.|.....|    :|.:|.|..::|...|.|.|.|.|.|....:|.|.:.|:||
Zfish   169 PKISWR----HISPSARKYE----SGEYLNITGISRDQAGDYECGAENDIASPDTKTVRVTV
NFP 225

  Fly   328 PMIWIQNQLVGAALTQNITLECQSEAYPKSINYWMKNDTIIVPGERFVPETFESGYKITMR-LTI 391
            |.|. :.:..|....|...|.|::.|.|..:..|.|.:..|..|:..|.....|...:|:: :| 
Zfish   226 PAIH-EMKSHGVRPGQVALLRCEAAAVPSPVFEWYKGEKRINMGQGIVINNLSSRSVLTVKNMT- 288

  Fly   392 YEVDIQD-FGAYRCVAKNSLGDTDGAIKLYHIPQTTTMTTMAPTVS 436
                 || :|.|.|||.|.||..:.::.|..|.:.||.:.::...|
Zfish   289 -----QDRYGNYTCVAVNRLGTANASVPLNPIIEPTTTSAVSSPAS 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 30/96 (31%)
Ig strand B 147..151 CDD:409353 2/3 (67%)
Ig strand C 160..164 CDD:409353 2/3 (67%)
Ig strand E 195..199 CDD:409353 1/3 (33%)
Ig strand F 209..214 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 1/2 (50%)
Ig 232..324 CDD:472250 34/91 (37%)
Ig strand B 251..255 CDD:409275 2/3 (67%)
Ig strand C 264..268 CDD:409275 1/3 (33%)
Ig strand E 289..293 CDD:409275 1/3 (33%)
Ig strand F 303..308 CDD:409275 2/4 (50%)
Ig strand G 317..320 CDD:409275 1/2 (50%)
Ig_3 327..408 CDD:464046 24/82 (29%)
negr1XP_009300786.1 Ig 42..121 CDD:472250 24/76 (32%)
Ig strand B 55..59 CDD:409353 2/3 (67%)
Ig strand C 67..71 CDD:409353 2/3 (67%)
Ig strand E 102..106 CDD:409353 1/3 (33%)
Ig strand F 116..121 CDD:409353 2/4 (50%)
Ig 140..222 CDD:472250 34/91 (37%)
Ig strand B 157..161 CDD:409256 2/3 (67%)
Ig strand C 170..174 CDD:409256 1/3 (33%)
Ig strand E 187..191 CDD:409256 1/3 (33%)
Ig strand F 201..206 CDD:409256 2/4 (50%)
Ig strand G 215..218 CDD:409256 1/2 (50%)
Ig 236..312 CDD:472250 23/81 (28%)
Ig strand B 242..246 CDD:409353 1/3 (33%)
Ig strand C 255..259 CDD:409353 0/3 (0%)
Ig strand E 280..284 CDD:409353 0/3 (0%)
Ig strand F 294..299 CDD:409353 2/4 (50%)
Ig strand G 307..310 CDD:409353 0/2 (0%)

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