DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-theta and HSPG2

DIOPT Version :10

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_011539620.1 Gene:HSPG2 / 3339 HGNCID:5273 Length:4574 Species:Homo sapiens


Alignment Length:341 Identity:87/341 - (25%)
Similarity:131/341 - (38%) Gaps:89/341 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LLQNVTVPVSREAV-------LQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNHRMSITHAEK 192
            |.|.:.:..|...|       |.|||......::.|.:         :...:...|:   ||..:
Human  3106 LAQPIYIEASSSHVTEGQTLDLNCVVPGQAHAQVTWYK---------RGGSLPARHQ---THGSQ 3158

  Fly   193 RAWILRIRDVKESDKGWYMCQINTDPMKSQVGYLDVVVPPD------------ILDYPTSTDMVI 245
                ||:..|..:|.|.|:|:..:.|...|.....|.|||.            .:|.|:||   :
Human  3159 ----LRLHLVSPADSGEYVCRAASGPGPEQEASFTVTVPPSEGSSYRLRSPVISIDPPSST---V 3216

  Fly   246 REGSNVTLKCAATGSPTP-TITWRREGGELIPLPNGAEAVAYNGSFLTIAKVNRLNMGAYLCIAS 309
            ::|.:.:.||.......| ::.|:....||    .....::.|||.:||......|.|.|.|:||
Human  3217 QQGQDASFKCLIHDGAAPISLEWKTRNQEL----EDNVHISPNGSIITIVGTRPSNHGTYRCVAS 3277

  Fly   310 N--GIPPTVSKRVMLIVHFPPM--------IWIQNQLVGAALTQNITLECQSEAYPKSINYWMKN 364
            |  |:..:|   |.|.||.||.        :|::   ||.|    :||||.|...|:|...|.:.
Human  3278 NAYGVAQSV---VNLSVHGPPTVSVLPEGPVWVK---VGKA----VTLECVSAGEPRSSARWTRI 3332

  Fly   365 DTIIVPGERFVPETFESGYKITMR----------LTIYEVDIQDFGAYRCVAKNSLGDTDGAIKL 419
            .:  .|.            |:..|          |.|......|.|.|.|:|:|:||.....:::
Human  3333 SS--TPA------------KLEQRTYGLMDSHAVLQISSAKPSDAGTYVCLAQNALGTAQKQVEV 3383

  Fly   420 YHIPQTTTMTTMAPTV 435
              |..|..|...||.|
Human  3384 --IVDTGAMAPGAPQV 3397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 21/99 (21%)
Ig strand B 147..151 CDD:409353 2/10 (20%)
Ig strand C 160..164 CDD:409353 0/3 (0%)
Ig strand E 195..199 CDD:409353 1/3 (33%)
Ig strand F 209..214 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 1/2 (50%)
Ig 232..324 CDD:472250 28/106 (26%)
Ig strand B 251..255 CDD:409275 0/3 (0%)
Ig strand C 264..268 CDD:409275 0/3 (0%)
Ig strand E 289..293 CDD:409275 1/3 (33%)
Ig strand F 303..308 CDD:409275 2/4 (50%)
Ig strand G 317..320 CDD:409275 0/2 (0%)
Ig_3 327..408 CDD:464046 24/98 (24%)
HSPG2XP_011539620.1 Ig strand G 3834..3837 CDD:409353
LamG 3848..4008 CDD:238058
EGF_CA <4035..4064 CDD:238011
EGF_CA <4076..4105 CDD:238011
LamG 4117..4266 CDD:238058
EGF 4291..4321 CDD:394967
EGF_CA 4328..4359 CDD:238011
LamG 4386..4545 CDD:238058
SEA 80..193 CDD:214554
LDLa 216..251 CDD:238060
LDLa 302..336 CDD:238060
LDLa 342..376 CDD:238060
LDLa 385..420 CDD:238060
Ig_Perlecan_like 438..515 CDD:143220
Ig strand B 441..447 CDD:143220
Ig strand C 454..459 CDD:143220
Ig strand E 479..483 CDD:143220
Ig strand F 492..498 CDD:143220
Ig strand G 507..513 CDD:143220
LamB 608..734 CDD:214597
EGF_Lam 782..824 CDD:238012
EGF_Lam 831..888 CDD:238012
Laminin_EGF 897..939 CDD:395007
LamB 1003..1130 CDD:214597
EGF_Lam 1176..1225 CDD:238012
EGF_Lam 1227..1282 CDD:238012
Laminin_EGF 1293..1340 CDD:395007
LamB 1574..1699 CDD:214597
EGF_Lam 1746..1794 CDD:238012
Laminin_EGF 1796..1851 CDD:395007
IG_like 1866..1946 CDD:214653
Ig strand B 1877..1881 CDD:409353
Ig strand C 1890..1895 CDD:409353
Ig strand E 1912..1916 CDD:409353
Ig strand F 1926..1931 CDD:409353
Ig strand G 1939..1942 CDD:409353
IgI_Perlecan_like 1954..2039 CDD:409412
Ig strand A 1954..1958 CDD:409412
Ig strand A' 1963..1966 CDD:409412
Ig strand B 1970..1980 CDD:409412
Ig strand C 1986..1990 CDD:409412
Ig strand C' 1993..1995 CDD:409412
Ig strand D 2000..2005 CDD:409412
Ig strand E 2006..2012 CDD:409412
Ig strand F 2019..2027 CDD:409412
Ig strand G 2030..2039 CDD:409412
Ig 2049..2133 CDD:472250
Ig strand B 2066..2070 CDD:409353
Ig strand C 2079..2082 CDD:409353
Ig strand E 2099..2103 CDD:409353
Ig strand F 2113..2118 CDD:409353
Ig strand G 2126..2129 CDD:409353
I-set 2139..2225 CDD:400151
Ig strand B 2156..2160 CDD:409353
Ig strand C 2169..2173 CDD:409353
Ig strand E 2191..2195 CDD:409353
Ig strand F 2205..2210 CDD:409353
IG_like 2240..2317 CDD:214653
Ig strand B 2251..2255 CDD:409353
Ig strand C 2264..2268 CDD:409353
Ig strand E 2284..2287 CDD:409353
Ig strand F 2297..2302 CDD:409353
Ig strand G 2310..2313 CDD:409353
IG_like 2341..2418 CDD:214653
Ig strand B 2352..2356 CDD:409353
Ig strand C 2365..2369 CDD:409353
Ig strand E 2384..2388 CDD:409353
Ig strand F 2398..2403 CDD:409353
Ig strand G 2411..2414 CDD:409353
IG_like 2434..2508 CDD:214653
Ig strand B 2445..2449 CDD:409353
Ig strand C 2458..2462 CDD:409353
Ig strand E 2478..2481 CDD:409353
Ig strand F 2491..2496 CDD:409353
IG_like 2530..2607 CDD:214653
Ig strand C 2554..2558 CDD:409353
Ig strand E 2573..2577 CDD:409353
Ig strand F 2587..2592 CDD:409353
Ig 2620..2703 CDD:472250
Ig strand C 2650..2654 CDD:409353
Ig strand E 2669..2673 CDD:409353
Ig strand F 2683..2688 CDD:409353
IG_like 2731..2800 CDD:214653
Ig strand C 2747..2751 CDD:409353
Ig strand E 2766..2770 CDD:409353
Ig strand F 2780..2785 CDD:409353
IG_like 2819..2896 CDD:214653
Ig strand C 2843..2847 CDD:409353
Ig strand E 2862..2866 CDD:409353
Ig strand F 2876..2881 CDD:409353
Ig strand G 2890..2893 CDD:409353
IG_like 2916..2993 CDD:214653
Ig strand C 2940..2944 CDD:409353
Ig strand E 2959..2963 CDD:409353
Ig strand F 2973..2978 CDD:409353
IG_like 3016..3093 CDD:214653
Ig strand B 3027..3031 CDD:409353
Ig strand C 3040..3044 CDD:409353
Ig strand E 3059..3063 CDD:409353
Ig strand F 3073..3078 CDD:409353
Ig strand G 3086..3089 CDD:409353
IG_like 3115..3192 CDD:214653 20/92 (22%)
Ig strand B 3125..3129 CDD:409353 1/3 (33%)
Ig strand C 3138..3142 CDD:409353 0/3 (0%)
Ig strand E 3158..3161 CDD:409353 1/6 (17%)
Ig strand F 3171..3176 CDD:409353 2/4 (50%)
Ig strand G 3184..3188 CDD:409353 1/3 (33%)
Ig 3205..3291 CDD:472250 27/95 (28%)
Ig strand B 3222..3226 CDD:409353 0/3 (0%)
Ig strand C 3235..3240 CDD:409353 0/4 (0%)
Ig strand E 3257..3261 CDD:409353 1/3 (33%)
Ig strand F 3271..3276 CDD:409353 2/4 (50%)
Ig strand G 3284..3287 CDD:409353 1/5 (20%)
IG_like 3303..3385 CDD:214653 25/104 (24%)
Ig strand B 3313..3317 CDD:409353 2/3 (67%)
Ig strand C 3326..3330 CDD:409353 0/3 (0%)
Ig strand E 3351..3355 CDD:409353 1/3 (33%)
Ig strand F 3365..3370 CDD:409353 2/4 (50%)
Ig 3404..3478 CDD:472250
Ig strand B 3412..3416 CDD:409353
Ig strand C 3425..3429 CDD:409353
Ig strand E 3444..3448 CDD:409353
Ig strand F 3458..3463 CDD:409353
Ig strand G 3471..3474 CDD:409353
I-set 3482..3565 CDD:400151
Ig strand B 3499..3503 CDD:409353
Ig strand C 3512..3516 CDD:409353
Ig strand E 3531..3535 CDD:409353
Ig strand F 3545..3550 CDD:409353
Ig 3588..3666 CDD:472250
Ig strand B 3600..3604 CDD:409353
Ig strand C 3613..3617 CDD:409353
Ig strand E 3632..3636 CDD:409353
Ig strand F 3646..3651 CDD:409353
Ig strand G 3659..3662 CDD:409353
Ig 3676..3755 CDD:472250
Ig strand B 3689..3693 CDD:409353
Ig strand C 3702..3706 CDD:409353
Ig strand E 3721..3725 CDD:409353
Ig strand F 3735..3740 CDD:409353
I-set 3764..3841 CDD:400151
Ig strand B 3775..3779 CDD:409353
Ig strand C 3788..3792 CDD:409353
Ig strand E 3807..3811 CDD:409353
Ig strand F 3821..3826 CDD:409353
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.