DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and Vsig10

DIOPT Version :9

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001258265.1 Gene:Vsig10 / 304529 RGDID:1565800 Length:564 Species:Rattus norvegicus


Alignment Length:429 Identity:87/429 - (20%)
Similarity:146/429 - (34%) Gaps:168/429 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 QNKDELLEDIREDTVVNAIP--EKDLPKFGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDT 168
            |:...:|..|..|     :|  :.:....||:.:|||        |:|...:.....:.|.|.|:
  Rat    36 QSNSPVLPGIHPD-----LPFTDSEAVAIGEVHENVT--------LRCGSLSGSRGLVTWYRNDS 87

  Fly   169 QTILTIQNHVITKNHRMSITHAEKR-----AWILRIRDVKESDKGWYMCQ--INTD---PMKSQV 223
            :....:.::       .|:..|..|     |..|||..::..|.|.|.|:  :|..   |::.:|
  Rat    88 EPAFLVSSN-------SSLPPAAPRFSLEDAGALRIEALRLEDDGNYTCREVLNETHWFPVQLRV 145

  Fly   224 ----GYLDVVVPPDILDYPTST----DMVIREGSNVTLKCAATGSPTPTITWRREGGELIPLPNG 280
                .::||.:.      .|.|    .:....||.|...|.:...|.|.:.|..:....:     
  Rat   146 TSGPAHIDVNIS------ATGTLPNGTLYAARGSQVDFSCCSAAQPPPEVEWWIQTHSSV----- 199

  Fly   281 AEAVAYN---GSFLTIAKVNRLNMGAYLCIASNGIPPTVSKR-----VMLIVHFPP--------- 328
            :|::..|   .|| |:..:::...|.|.|.|:|    .:|:|     ..|:|::||         
  Rat   200 SESLGKNLSANSF-TLMLMSKNLQGNYTCSATN----VLSRRQRKVTTELLVYWPPPSAPQCSAG 259

  Fly   329 ----------------------MIWIQNQ---LVGAALTQ------------------------- 343
                                  .:|.:..   :||.:..|                         
  Rat   260 LSPESANLELTCNWDGGYPDPTFLWTEEPGGVVVGNSKLQTLSPSQLSEGKKFKCVGSHILGPES 324

  Fly   344 -------------------------NITLECQSE-AYPKSINYWMKN----DTIIVPGERFVPET 378
                                     ::||.||.| |.|.:...|::|    :|.|.|..|:|   
  Rat   325 GASCVVQISSPLLASRPMKTCLVGGDVTLTCQVEGANPPARIQWLRNLTQPETAIQPSSRYV--- 386

  Fly   379 FESGYKITMR-----LTIYEV-DIQDFGAYRCVAKNSLG 411
                  ||.:     |||:.. ..||.|.|.|.|:|.:|
  Rat   387 ------ITQQGQSSSLTIHNCSQDQDGGFYFCRAENPVG 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 24/106 (23%)
IG_like 137..230 CDD:214653 24/106 (23%)
IG_like 240..324 CDD:214653 21/95 (22%)
IGc2 247..310 CDD:197706 16/65 (25%)
Ig 327..419 CDD:299845 33/180 (18%)
IG_like 343..420 CDD:214653 28/130 (22%)
Vsig10NP_001258265.1 Ig 60..146 CDD:299845 23/100 (23%)
IG_like 60..145 CDD:214653 23/99 (23%)
IG_like 165..246 CDD:214653 20/90 (22%)
Ig 175..241 CDD:143165 17/75 (23%)
Ig_3 255..318 CDD:290638 4/62 (6%)
IG_like 347..429 CDD:214653 27/82 (33%)
Ig 351..426 CDD:143165 27/78 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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