DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and ncam1a

DIOPT Version :9

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_009293555.1 Gene:ncam1a / 30447 ZFINID:ZDB-GENE-990415-31 Length:1010 Species:Danio rerio


Alignment Length:542 Identity:125/542 - (23%)
Similarity:206/542 - (38%) Gaps:111/542 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 IGESEEHDHIAHHLAEMQNKDELLEDIRE-DTVVNAIPEKDLPKFGELLQNVTVPVSREAVLQCV 152
            |.:::|.|:...  ..:..:.|:  |:|. ..:||.:| ....::.||  |.|..:::...|.|.
Zfish   176 IKKTDEGDYTCE--GRIMARGEI--DLRVIKVIVNVLP-SIRTRYTEL--NATADINQAVTLACH 233

  Fly   153 VDNLQTYKIAWLRVDTQTILTIQNHVITKNHRMSITHAEKRAWILRIRDVKESDKGWYMC-QINT 216
            .|......:.|.|.:|:         :..:.:.|:......   |.|:||.:.|:|.|.| ..|.
Zfish   234 ADGYPEPTVKWARGNTE---------LESDEKYSLNEDGSE---LTIKDVNKLDEGDYKCIARNK 286

  Fly   217 DPMKSQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLKCAATGSPTPTITW-------------- 267
            ...:|:...|:|.|.|.|......|...:.|  .:||.|.|||.|||.|.|              
Zfish   287 AGERSEEVTLNVFVQPKITFLENQTASELEE--QITLTCEATGDPTPNIIWSFGRRVFTENEQAS 349

  Fly   268 --RREGGELIPLPNGAEAVAYNG--SFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVMLIVHFPP 328
              |.|..:.:   :|...|..:.  |.||:..|...:.|.|||.|.|.|...: :.:.|.|.:.|
Zfish   350 WTRPEKHKSL---DGNVVVRSDARVSSLTLKYVQFTDAGQYLCTARNSIGQDI-QSMYLEVRYAP 410

  Fly   329 MI--------WIQNQLVGAALTQNITLECQSEAYPKSINYWMKNDTIIVPGERFVPETFESGYKI 385
            .|        |..|       ..|||  |::.|:|.:...|.::      |:: :|....:..||
Zfish   411 KIQGPQAVFTWEGN-------PANIT--CEALAHPGASVLWFRD------GQQ-LPSANTTNVKI 459

  Fly   386 --TMRLTIYEV--DIQ-DFGAYRCVAKNSLG-----------DTDGAIKLYHIP--QTTTMTTMA 432
              |..::..||  |.| |||:|.|.|.|.:|           |...|..:..:.  .:|.|....
Zfish   460 YNTPTVSFLEVTPDSQNDFGSYNCTATNVIGTESKEFILVQADVPSAPSIERVEPYSSTAMIEFE 524

  Fly   433 PTVSINTVPVVLVKYNKEQRYGSSQNSNTNPYNFNPG-----------NSQQNTKLQRGKSNSKG 486
            ...|...|||  :||..|.|. :.|:.....|....|           .:....|:.......:|
Zfish   525 EPASSGGVPV--LKYKAEWRI-AGQDWTDREYELEDGLNLITIVGLKPETTYEVKISAINGKGEG 586

  Fly   487 SDQSPSGLNNVFVGATSSLWNSQDHHSSSSSSSSASSRGRDHHQQQHHQQQQQNHGSDHGASY-- 549
            ...:|.......|...   :.......:|...::|..:|..:..:.  :.:.|:.|::....:  
Zfish   587 ESSAPESFKTQPVRLP---FRMSPETPTSIPPTTADIKGEPNPPKL--EAKPQSTGNEMKVHFIK 646

  Fly   550 RSDGKSP---HLTNHDAKSLTD 568
            :.||.||   :|..:.||:..|
Zfish   647 QDDGGSPIKHYLVRYRAKNRQD 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 21/93 (23%)
IG_like 137..230 CDD:214653 21/93 (23%)
IG_like 240..324 CDD:214653 29/101 (29%)
IGc2 247..310 CDD:197706 25/80 (31%)
Ig 327..419 CDD:299845 30/115 (26%)
IG_like 343..420 CDD:214653 26/92 (28%)
ncam1aXP_009293555.1 Ig 20..112 CDD:299845
I-set 21..111 CDD:254352
IG_like 121..200 CDD:214653 5/27 (19%)
IGc2 128..189 CDD:197706 3/14 (21%)
Ig 208..301 CDD:299845 24/107 (22%)
IG_like 219..298 CDD:214653 20/90 (22%)
Ig 300..406 CDD:299845 32/111 (29%)
IG_like 308..406 CDD:214653 29/103 (28%)
ig 413..498 CDD:278476 26/100 (26%)
IG_like 415..498 CDD:214653 26/98 (27%)
fn3 505..589 CDD:278470 16/86 (19%)
FN3 624..715 CDD:238020 10/47 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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