DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and Lsamp

DIOPT Version :10

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_030104997.1 Gene:Lsamp / 268890 MGIID:1261760 Length:392 Species:Mus musculus


Alignment Length:335 Identity:106/335 - (31%)
Similarity:159/335 - (47%) Gaps:51/335 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 EDTV-VNAIPEKDLP----KFGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQN 176
            |:|: ..|..|:.||    .|.....|:||.....|:|:|||:: :..|:|||.         ::
Mouse    45 EETMRKKAKEEEGLPVRSVDFNRGTDNITVRQGDTAILRCVVED-KNSKVAWLN---------RS 99

  Fly   177 HVITKNH-------RMSITHAEKRAWILRIRDVKESDKGWYMCQINT--DPMKSQVGYLDVVVPP 232
            .:|...|       |:.:.......:.|||:.|...|:|.|.|.:.|  :|..||| ||.|.|||
Mouse   100 GIIFAGHDKWSLDPRVELEKRHALEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQV-YLIVQVPP 163

  Fly   233 DILDYPTSTDMVIREGSNVTLKCAATGSPTPTITWRREGGELIPLPNGAEAVAYNG--SFLTIAK 295
            .|.:  .|:|:.:.|||||||.|.|.|.|.|.||||    .|.||  |.|   :.|  .:|.|..
Mouse   164 KISN--ISSDVTVNEGSNVTLVCMANGRPEPVITWR----HLTPL--GRE---FEGEEEYLEILG 217

  Fly   296 VNRLNMGAYLCIASNGIPPTVSKRVMLIVHFPPMIWIQNQLVGAALTQNITLECQSEAYPKSINY 360
            :.|...|.|.|.|:|.:.....|:|.:.|::||.| .:::...|...:..:|:|::.|.|.....
Mouse   218 ITREQSGKYECKAANEVSSADVKQVKVTVNYPPTI-TESKSNEATTGRQASLKCEASAVPAPDFE 281

  Fly   361 WMKNDTIIVPGERFVPETFESGYKITMRLTIYEVDIQDFGAYRCVAKNSLGDTDGAIKLYHIPQT 425
            |.::||.|........::.|.    ...||:..|..:.:|.|.|||.|.||.|:.::.|:     
Mouse   282 WYRDDTRINSANGLEIKSTEG----QSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLF----- 337

  Fly   426 TTMTTMAPTV 435
               ..:.|||
Mouse   338 ---KRVLPTV 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 31/101 (31%)
Ig strand B 147..151 CDD:409353 2/3 (67%)
Ig strand C 160..164 CDD:409353 2/3 (67%)
Ig strand E 195..199 CDD:409353 1/3 (33%)
Ig strand F 209..214 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 2/2 (100%)
Ig 232..324 CDD:472250 36/93 (39%)
Ig strand B 251..255 CDD:409275 3/3 (100%)
Ig strand C 264..268 CDD:409275 2/3 (67%)
Ig strand E 289..293 CDD:409275 1/3 (33%)
Ig strand F 303..308 CDD:409275 2/4 (50%)
Ig strand G 317..320 CDD:409275 1/2 (50%)
Ig_3 327..408 CDD:464046 21/80 (26%)
LsampXP_030104997.1 Ig 69..159 CDD:472250 30/100 (30%)
Ig strand B 80..84 CDD:409353 2/3 (67%)
Ig strand C 92..96 CDD:409353 2/3 (67%)
Ig strand E 125..129 CDD:409353 1/3 (33%)
Ig strand F 139..144 CDD:409353 2/4 (50%)
Ig strand G 152..155 CDD:409353 1/2 (50%)
Ig_3 162..232 CDD:464046 34/80 (43%)
Ig_3 249..325 CDD:464046 21/80 (26%)

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