DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and Lrit3

DIOPT Version :9

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:582 Identity:114/582 - (19%)
Similarity:188/582 - (32%) Gaps:171/582 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RLIVATATAAVVSIICLSLALPGCAAQESDDEGELHHLDQMHHQHQDFIIGESEEHDHIAHHLAE 104
            |.:.|.|...:|.:..|.||....|:.|:   ...::|.|:|                       
Mouse    70 RRLPAEAFYYLVELQYLWLAYNSVASIET---SSFYNLRQLH----------------------- 108

  Fly   105 MQNKDELLEDIREDTVVNAIPEKDLPKFG--ELLQNVTVPVSREAV-----LQCVVDNLQTYKIA 162
                 ||..|....|....:...|:|...  :|..|....|..|||     |.|:  :|.:.::.
Mouse   109 -----ELRLDGNSLTAFPWVSLLDMPHLRTLDLHNNRIASVPNEAVRYLRNLTCL--DLSSNRLT 166

  Fly   163 WLRVDTQTILTIQNHV-ITKNH------RMSITHAEKRAWI--LRIRDVKESDKGWYMCQINTDP 218
            .|..|   .|...:|: :|.:.      |..|...:...|.  ..|..|.|..|......:..||
Mouse   167 TLPPD---FLDSWSHLAVTPSRSPDFPPRRIILGLQDNPWFCDCHISKVIELSKVTDHAVVLLDP 228

  Fly   219 MK------------SQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLKCAATGSPTPTITWRREG 271
            :.            .|...|:..:.|.::  .::|.:....||||.|:|.|.|.|||.:||.|..
Mouse   229 LMVCSEPERFQGILFQRVELEKCLKPSVM--MSATKITSALGSNVLLRCDAKGHPTPQLTWTRSD 291

  Fly   272 GELIPL----PNGAEAVAYNGSFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVMLIVHFPPMIWI 332
            |..:..    .:..|.:.:  |.:::..::..:.|.|.|.|.|                  :..|
Mouse   292 GSTVNYTVIQESPGEGIRW--SIISLTSISHKDAGDYRCKAKN------------------LAGI 336

  Fly   333 QNQLVGAALTQNITLECQSEAYPKSINYWMKNDTIIVPGERFVPETFESGYKITMRLTIYEVDIQ 397
            ...:|...:...:|.....::..:|            |||  .||....               .
Mouse   337 SEAVVTVTVVGGVTTTLSPDSSERS------------PGE--PPEQHPQ---------------P 372

  Fly   398 DFGAYRCVAKNSLGDTDGAIKLYHIPQTTTMT-TMAP--------------TVSINTVPVVLVKY 447
            ..|.....:|:.|.....:...|..|.....| |.:|              |.|:.|        
Mouse   373 GLGGSTPPSKSWLSPGLTSAPSYPTPSAALYTSTWSPPPSSLPPIFSAASATTSVQT-------- 429

  Fly   448 NKEQRYGSSQNSNTNPYNFNPGNSQQNTKLQR-GK-----SNSKGS-----DQSPSGLNNVFV-- 499
               ...|.:..::..|...:|| .:.|.|::: |:     |.||..     ||:.....||.:  
Mouse   430 ---SISGRTARTSHQPPLLHPG-GKSNAKIEKNGRKFPPLSASKKEELALLDQAAPMETNVTIKD 490

  Fly   500 -------GATSSL-WNSQDHHSSSSSSSSASSRGRDH----HQQQHHQQQQQNHGSDHGASY 549
                   |.:.:| |||......||.:...|..|...    :...:.:.|...:|.:.|:.|
Mouse   491 LRVARETGVSVTLMWNSSSSTQESSVTVLYSKYGEKDLLLVNADDYGKNQATINGLEPGSQY 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 24/118 (20%)
IG_like 137..230 CDD:214653 24/118 (20%)
IG_like 240..324 CDD:214653 23/87 (26%)
IGc2 247..310 CDD:197706 21/66 (32%)
Ig 327..419 CDD:299845 12/91 (13%)
IG_like 343..420 CDD:214653 10/76 (13%)
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79 3/8 (38%)
LRR_8 61..117 CDD:290566 15/77 (19%)
LRR 2. /evidence=ECO:0000255 80..103 6/25 (24%)
leucine-rich repeat 83..106 CDD:275378 6/25 (24%)
LRR 3. /evidence=ECO:0000255 104..128 7/51 (14%)
LRR_8 105..165 CDD:290566 17/89 (19%)
LRR_4 106..146 CDD:289563 11/67 (16%)
leucine-rich repeat 107..130 CDD:275378 6/50 (12%)
LRR_4 129..170 CDD:289563 11/42 (26%)
LRR 4. /evidence=ECO:0000255 129..151 7/21 (33%)
leucine-rich repeat 131..154 CDD:275378 6/22 (27%)
LRR 5. /evidence=ECO:0000255 152..175 6/27 (22%)
leucine-rich repeat 155..168 CDD:275378 3/14 (21%)
Ig 254..335 CDD:299845 24/102 (24%)
IG_like 263..339 CDD:214653 23/95 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..391 10/69 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..464 9/50 (18%)
FN3 489..563 CDD:238020 13/64 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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