DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and igcm-2

DIOPT Version :9

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001362087.1 Gene:igcm-2 / 180913 WormBaseID:WBGene00020130 Length:802 Species:Caenorhabditis elegans


Alignment Length:535 Identity:117/535 - (21%)
Similarity:174/535 - (32%) Gaps:202/535 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 PEKDLPKFGELLQNVTVPV----SREAVL----------QCVVDNLQTYKIAWLR----VDTQTI 171
            |||.|.  .:|:.||. ||    |:.|::          :|..:...:.:|.|.|    :.|..:
 Worm   110 PEKGLS--AKLVVNVP-PVIISPSKNAIIHKKVGADLIFECKAEGAPSPEITWSRNEQIISTSPV 171

  Fly   172 LTIQNHV-------------ITKNHRMSI----------------------------THAEKRA- 194
            ||:.|..             |..|...||                            .||..:| 
 Worm   172 LTLSNLEEGDKGLYTCLAVNIEGNSTSSIDVRFTKATILDLIPLNKTVIEGSNVFWHCHANAQAT 236

  Fly   195 -----WI---------------------LRIRDVKESDKGWYMCQI--NTDPMKSQVGYLDVVVP 231
                 |:                     |.::||::||.|||.|:.  :.....|...||.|..|
 Worm   237 AISYSWLFEKKPIKTTSLGLRSNIRSGDLSLQDVRKSDSGWYTCEAKNSAGETTSSTAYLHVFYP 301

  Fly   232 PDILD--YPTSTDMVIREGSNVTLKCAATGSPTPT-ITWRREGGELIPLPNGAEAVAYNGSFLTI 293
            |:.|.  .|..|   :..|.|.|:.|....:|||| .||.:.|..   ||..|      .|.:.|
 Worm   302 PEPLSSHQPVQT---VASGRNTTVSCDVIANPTPTSYTWSKNGHY---LPTQA------SSHIII 354

  Fly   294 AKVNRLNMGAYLCIASNGIPPTVSKRVMLIVHFPPMIWI-QNQLVGAALTQNITLECQSEAYPKS 357
            :.....:.|.|.|.|.|...........|||..||:..: ....:...|...:::.||....|..
 Worm   355 SYAKPGDGGIYGCQADNIAGKGSIVETHLIVAEPPVFTVAPPSEIKVRLGDQVSIPCQGFGDPMP 419

  Fly   358 INYWMKNDTIIVPGERFVPETFESGYKITMRLTIYEVDIQDFGAYRCVAKNSLGDTDGAIKLYHI 422
            |.||:::.      :|....|          ||..:|:..|.|||.||..||:            
 Worm   420 IVYWIRDK------KRINQST----------LTFKKVEHLDHGAYECVVANSV------------ 456

  Fly   423 PQTTTMTTMAPTVSINTVPVVLVKYNKEQRYGSSQ----NSNTNPYNFNPG-----------NSQ 472
                        .:|:|..::||:..|.|...|.:    ||::...::.||           ::|
 Worm   457 ------------ETISTRVMLLVEITKPQMASSIKFTCLNSSSMRISWTPGYNGGFDQTFAVHAQ 509

  Fly   473 QNTKLQ-------------------------RGKSNSKGSDQS-------------PSGLNNVFV 499
            .:..||                         ....|:|||..|             |..|  .|.
 Worm   510 NDVTLQWTSIKTSLNETILDHLEPFVSYRVSIESVNAKGSTNSTTYNRRSCTSLHAPDKL--YFC 572

  Fly   500 GATSSLWNSQDHHSS 514
            |.....|.:.:..||
 Worm   573 GYNELCWTAAEGASS 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 35/180 (19%)
IG_like 137..230 CDD:214653 35/180 (19%)
IG_like 240..324 CDD:214653 23/84 (27%)
IGc2 247..310 CDD:197706 20/63 (32%)
Ig 327..419 CDD:299845 22/92 (24%)
IG_like 343..420 CDD:214653 19/76 (25%)
igcm-2NP_001362087.1 IG_like 23..101 CDD:214653
Ig 124..200 CDD:386229 14/75 (19%)
IG_like 214..298 CDD:214653 16/83 (19%)
Ig_3 309..371 CDD:372822 22/73 (30%)
Ig 389..467 CDD:386229 23/117 (20%)
FN3 476..548 CDD:238020 9/71 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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