DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and Ncam1

DIOPT Version :9

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_006510118.1 Gene:Ncam1 / 17967 MGIID:97281 Length:1162 Species:Mus musculus


Alignment Length:368 Identity:85/368 - (23%)
Similarity:152/368 - (41%) Gaps:55/368 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LLQNVTVP----VSREAVLQCVVDNLQTYKIAWLRVDTQTIL--TIQNHVITKNHRMSITHAEKR 193
            :.:|...|    ...:||:.|.|.:.....|.|.......||  .::..|::.|:          
Mouse   119 MFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY---------- 173

  Fly   194 AWILRIRDVKESDKGWYMCQINTDPMKSQVGYLD----VVVPPDILDYPTSTDMVIREGSNVTLK 254
               |:||.:|::|:|.|.|: .....:.::.:.|    |.|||.:....:..:.....|.:|||.
Mouse   174 ---LQIRGIKKTDEGTYRCE-GRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLV 234

  Fly   255 CAATGSPTPTITWRREGGELIPLPNGAE-----AVAYNGSFLTIAKVNRLNMGAYLCIASNGIPP 314
            |.|.|.|.||::|.::|.   |:.|..|     ..:.:.|.|||..|::.:...|:|||.|....
Mouse   235 CDADGFPEPTMSWTKDGE---PIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGE 296

  Fly   315 TVSKRVMLIVHFPPMIWIQNQLVGAALTQNITLECQSEAYPKSINYWMKNDTIIVPGERFV---P 376
            ..:...:.:...|.:.:::|| ....|.:.:||.|::...|.....|..:...|...|:..   |
Mouse   297 QDASIHLKVFAKPKITYVENQ-TAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKASWTRP 360

  Fly   377 ETFES--GYKI------TMRLTIYEVDIQDFGAYRCVAKNSLGDTDGA--IKLYHIPQ------- 424
            |..|:  |:.:      ...||:..:...|.|.|.|.|.|::|....:  :::.:.|:       
Mouse   361 EKQETLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQGPVAV 425

  Fly   425 -TTTMTTMAPTVSINTVPVVLVKYNKE-QRYGSSQNSNTNPYN 465
             |.....:..|..:...|...:.:.:: |...||..||...||
Mouse   426 YTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYN 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 22/102 (22%)
IG_like 137..230 CDD:214653 22/102 (22%)
IG_like 240..324 CDD:214653 25/88 (28%)
IGc2 247..310 CDD:197706 24/67 (36%)
Ig 327..419 CDD:299845 24/104 (23%)
IG_like 343..420 CDD:214653 20/89 (22%)
Ncam1XP_006510118.1 Ig1_NCAM-1 20..115 CDD:143273
IG 124..190 CDD:214652 18/78 (23%)
Ig3_NCAM-1_like 211..308 CDD:143207 27/99 (27%)
Ig_NCAM-1 307..413 CDD:143277 24/106 (23%)
Ig_3 417..494 CDD:372822 11/52 (21%)
FN3 509..606 CDD:238020
fn3 649..731 CDD:365830
PHA03247 <905..1140 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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