DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and rig-5

DIOPT Version :9

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001251131.1 Gene:rig-5 / 172791 WormBaseID:WBGene00004372 Length:482 Species:Caenorhabditis elegans


Alignment Length:413 Identity:126/413 - (30%)
Similarity:195/413 - (47%) Gaps:74/413 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 CVVDNLQTYKIAWLRVDT-QTILTIQNHVITKNH------RMSITHAEKRAWILRIRDVKESDKG 208
            |:|::|.::.:|:::.|: ..:|:....|..:.:      |:...|.|   |:|.|::|:|||:|
 Worm   106 CIVNDLGSHMVAFVKADSPPRLLSFDEKVFRRRNKYELKPRIGDLHNE---WVLTIKNVQESDRG 167

  Fly   209 WYMCQINTDPMKSQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLKCAATGSPTPTITWRREGGE 273
            .|.|||||:|:....|.|||.||| ::...|...:.:|||:||:|.|.|.|:||||:.|||:..:
 Worm   168 NYSCQINTEPITLSTGELDVKV
PP-VVSRSTPAAVEVREGNNVSLTCKADGNPTPTVIWRRQDRQ 231

  Fly   274 LIPLPNGAE---AVAYNGSFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVMLIVHFPPMIWIQNQ 335
            :|.. |||.   |..::|..|.:.||:|.:|..|||:|||||||..|..|.|:|.|||::..|::
 Worm   232 IIRY-NGATGFGASVFHGPVLHLTKVSRKHMSEYLCVASN
GIPPDESWTVKLLVTFPPLVQAQSE 295

  Fly   336 LVGAALTQNITLECQSEAYPKSINYWMKN-DTIIVPGERFVPETFESGYKITMRLTIYEVDIQDF 399
            .|.|::.....:.|.:||:|:....|.|: :.:.......:..|....|.....|.|..|....|
 Worm   296 TVQASVGSMARMVCTTEAWPRPEMGWEKDGEPVYESNNVAMTHTVSGQYHSVHILEIRNVQSSHF 360

  Fly   400 GAYRCVAKNSLGDTDGAIKLYHIPQTTTMTTMAPTVSINTVPVVLVKYNKEQRYGSSQNSNTNPY 464
            |.|||||||..|       ::|           ..|::|.:               |.|..||. 
 Worm   361 GVYRCVAKNDNG-------IHH-----------SQVTLNQI---------------SHNHFTNS- 391

  Fly   465 NFNPGNSQQNTKLQRGKSNSKGSDQSPSGLNNVFVGATSSLWNSQDHHSSSSSSSSASSRGRDHH 529
            |..|    :.:.:.||.|....:|:....|.|            |.:.|....|.|.        
 Worm   392 NLIP----EGSGMPRGYSEDDEADEEEDNLEN------------QKNDSEEEDSQSP-------- 432

  Fly   530 QQQHHQQQQQNHGSDHGASYRSD 552
            .|.....|.:.|.|.:..:.||:
 Worm   433 PQLEFYSQARRHESRNAPTTRSE 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 29/85 (34%)
IG_like 137..230 CDD:214653 29/85 (34%)
IG_like 240..324 CDD:214653 40/86 (47%)
IGc2 247..310 CDD:197706 30/65 (46%)
Ig 327..419 CDD:299845 26/92 (28%)
IG_like 343..420 CDD:214653 21/77 (27%)
rig-5NP_001251131.1 IG_like 92..189 CDD:214653 29/85 (34%)
Ig_3 191..270 CDD:372822 33/80 (41%)
IG 294..380 CDD:214652 25/103 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I6913
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I2513
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - otm14489
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3058
SonicParanoid 1 1.000 - - X97
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.100

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