DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-theta and LOC1270731

DIOPT Version :10

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_309450.5 Gene:LOC1270731 / 1270731 VectorBaseID:AGAMI1_007787 Length:484 Species:Anopheles gambiae


Alignment Length:459 Identity:122/459 - (26%)
Similarity:201/459 - (43%) Gaps:56/459 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 PKFGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNHRMSITHAEKRA 194
            |||....|:|...:.....|.|.|:||....:.|.|  ...::|..|.:||::.|..:.    ..
Mosquito    46 PKFTSRSQSVRAVIGDTITLPCEVENLGRNILLWRR--GSAVVTAANLIITRDTRFKLL----EG 104

  Fly   195 WILRIRDVKESDKGWYMCQINTDPMKSQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLKCAATG 259
            :.|:|::|:..|.|.|.|||.....:..|..::::|||.:...|.:..:.:|:|...||:|.|:|
Mosquito   105 YSLQIKNVRPQDAGDYNCQIGDHDNRDLVHTVEILVPPSVRSNPETGHVTVRKGGTATLECKASG 169

  Fly   260 SPTPTITWRREGGELIPLPNGAEAVAYNGSFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVMLIV 324
            :|.|:|:|.|: ..:...|:.:|     |..||:..|||.:.|.|.|.|.|||...|...:.|||
Mosquito   170 NPVPSISWTRK-DSIHGSPHLSE-----GPTLTLENVNRQDSGTYRCYADNGIREPVFVDMQLIV 228

  Fly   325 HFPPMIWIQNQLVGAALTQNITLEC--QSEAYPKSINYWMKNDTIIVPGERFVPET-FESGYKIT 386
            ..||.|.::...|.|.......|.|  ..:|.|:.:  |.::..::.|.:|...:| .|..|   
Mosquito   229 LSPPEITVEKSWVHAGEGYEAQLVCTVHGDANPEVM--WYQDSFLLHPNDRRTMDTRGEKHY--- 288

  Fly   387 MRLTIYEVDIQDFGAYRCVAKNSLGDTDGAIKL--------YHIPQTTTMTTMAP-TVSINTVPV 442
              ||:..|...|||.|.|||:||||.....|::        :|.|..:....|.. |.||.:.|:
Mosquito   289 --LTVRNVRASDFGNYSCVAENSLGRAKKYIEVSGRPGPAQFHSPMYSRYREMYNLTWSIESFPL 351

  Fly   443 ---VLVKYNKEQRYGSSQN-SNTNPYNFNPGNSQQNTKLQRGKSNSKGSDQSPSGLNNVFVGATS 503
               :.:.|.|.....:.|: ...:....||.:::..:.........||.|  |:.:....|.|.:
Mosquito   352 IEEIRLLYRKLMMNETFQHPGRWHDIILNPPSTRSESFRHIMTYTIKGLD--PNSVYETIVQAKN 414

  Fly   504 SL-WNSQDHHSSSSSSSSASSRGRDHHQQQHHQQQQQNHGSD-HGASYRSDGKSPHLTNHDAKSL 566
            .. ||.........:.|:          ...::..:|..||. :|.::|:       .||..:..
Mosquito   415 RYGWNEVSDIFQFYTLST----------DMPNEDVEQTLGSTAYGNNFRA-------LNHCPRLQ 462

  Fly   567 TDDL 570
            ||.:
Mosquito   463 TDGM 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 24/92 (26%)
Ig strand B 147..151 CDD:409353 1/3 (33%)
Ig strand C 160..164 CDD:409353 0/3 (0%)
Ig strand E 195..199 CDD:409353 1/3 (33%)
Ig strand F 209..214 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 0/2 (0%)
Ig 232..324 CDD:472250 31/91 (34%)
Ig strand B 251..255 CDD:409275 2/3 (67%)
Ig strand C 264..268 CDD:409275 1/3 (33%)
Ig strand E 289..293 CDD:409275 1/3 (33%)
Ig strand F 303..308 CDD:409275 2/4 (50%)
Ig strand G 317..320 CDD:409275 0/2 (0%)
Ig_3 327..408 CDD:464046 25/83 (30%)
LOC1270731XP_309450.5 None

Return to query results.
Submit another query.