DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and ncam1b

DIOPT Version :10

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_009289824.1 Gene:ncam1b / 114442 ZFINID:ZDB-GENE-010822-2 Length:1054 Species:Danio rerio


Alignment Length:593 Identity:136/593 - (22%)
Similarity:193/593 - (32%) Gaps:166/593 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 VVNAIPEKDLPKFGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNHR 184
            |||.:|   ..:..:...|.|..:....:|.|..|......:.|.|         .|..:...::
Zfish   204 VVNVLP---TIRIRQAETNATADMGFSTLLACDPDGFPEPIVTWRR---------NNAPLESGNK 256

  Fly   185 MSITHAEKRAWILRIRDVKESDKGWYMCQINTDPMKS-QVGYLDVVVPPDI--LDYPTSTDMVIR 246
            .|.........:|   ||.:.|:|.|.|.......:| |...|.|.|.|.|  |:..|:|:|   
Zfish   257 YSFNEDGSEMTVL---DVTKLDEGDYTCIAKNKAGESEQELSLKVFVQPKITYLESQTTTEM--- 315

  Fly   247 EGSNVTLKCAATGSPTPTITWR------REG---------------GELIPLPNGAEAVAYNG-- 288
             ...|||.|.|||.|||||||.      .||               .|....|:|...|..:.  
Zfish   316 -DEQVTLTCEATGDPTPTITWSFGTRVFTEGEQEQQKRIYQASWTRPEQHKGPDGEVLVRSDARV 379

  Fly   289 SFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVMLIVHFPPMI--------WIQNQLVGAALTQNI 345
            |.||:......:.|.|||.|.|.|..|| :.|.|.|.:.|.|        |..|.         .
Zfish   380 SSLTLKYPQYTDAGQYLCTARNAIGETV-QPVSLEVRYAPKILGSVAVYTWEGNP---------A 434

  Fly   346 TLECQSEAYPKSINY-WMKNDTIIVPGERFVPETFESGYKI--TMRLTIYEVDIQ---DFGAYRC 404
            .:.|:..|:|..::. |:::...:       |....|..||  |...:..||:.:   |||.|.|
Zfish   435 NISCEVLAHPSDVSITWLRDGFQL-------PNANTSNIKIHNTPSASYLEVNPESQSDFGNYNC 492

  Fly   405 VAKNSLGDTD----------------GAIKLYHIPQTTTMTTMAPTVSINTVPVVLVKYNKEQRY 453
            ...|.:|...                |.::.|   .:|.........|...|||  :||..|.|.
Zfish   493 TTSNEIGTESREFIMIPADVPSAPSIGEVQPY---SSTAQVLFEEPESTGGVPV--LKYRAEWRA 552

  Fly   454 GSSQNSNTNPYNFNPGNS---------QQNTKLQRGKSNSKG-SDQSPSGL-----------NNV 497
            ..........|....|.|         :.:.:::....|.|| .|.|||.:           |.:
Zfish   553 VGRGKWVQRVYEVKDGLSSVTVTGLKPETDYEVKMSAINGKGEGDSSPSMVFKTEHVRYSYTNGI 617

  Fly   498 F------VGATS-------------SL---WNSQDHHSSSSSSSSASSRGRDHHQQQHHQQQQQN 540
            |      .|..|             ||   |..||...|..:......:.|:..:.:...:....
Zfish   618 FHFHTEDTGEPSPPILEGTLQPKGNSLKVKWIKQDDGGSPITHYLVRYKAREDSEWKPEIRLPSG 682

  Fly   541 H------GSDHGASY-------RSDGKSP--HLTNHDAKSLTDDLDRMQDLKGWASRLSPISPIL 590
            .      |.|....|       ...|||.  .||...:...|...|.|:|           .|.|
Zfish   683 SEYVMLIGLDWDTEYDVFVVAENQQGKSKPGTLTFRTSSEPTATTDSMED-----------GPGL 736

  Fly   591 GLSMILGV 598
            ...:|:|:
Zfish   737 NTGVIVGI 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 20/93 (22%)
Ig strand B 147..151 CDD:409353 1/3 (33%)
Ig strand C 160..164 CDD:409353 0/3 (0%)
Ig strand E 195..199 CDD:409353 1/3 (33%)
Ig strand F 209..214 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 2/3 (67%)
Ig 232..324 CDD:472250 40/116 (34%)
Ig strand B 251..255 CDD:409275 3/3 (100%)
Ig strand C 264..268 CDD:409275 3/3 (100%)
Ig strand E 289..293 CDD:409275 2/3 (67%)
Ig strand F 303..308 CDD:409275 3/4 (75%)
Ig strand G 317..320 CDD:409275 0/2 (0%)
Ig_3 327..408 CDD:464046 20/94 (21%)
ncam1bXP_009289824.1 Ig 20..113 CDD:472250
Ig strand B 37..41 CDD:409353
Ig strand C 49..53 CDD:409353
Ig strand E 77..81 CDD:409353
Ig strand F 91..96 CDD:409353
Ig strand G 104..107 CDD:409353
Ig 117..186 CDD:472250
Ig strand B 132..136 CDD:409353
Ig strand C 145..149 CDD:409353
Ig strand E 169..173 CDD:409353
Ig strand F 183..188 CDD:409353
Ig strand G 198..201 CDD:409353
Ig 208..301 CDD:472250 21/107 (20%)
Ig strand B 228..232 CDD:409353 1/3 (33%)
Ig strand C 241..245 CDD:409353 0/3 (0%)
Ig strand E 264..268 CDD:409353 0/3 (0%)
Ig strand F 278..283 CDD:409353 2/4 (50%)
Ig strand G 291..294 CDD:409353 1/2 (50%)
Ig 300..414 CDD:472250 41/118 (35%)
Ig strand B 319..323 CDD:409353 3/3 (100%)
Ig strand C 332..336 CDD:409353 3/3 (100%)
Ig strand E 380..384 CDD:409353 2/3 (67%)
Ig strand F 394..399 CDD:409353 3/4 (75%)
Ig strand G 407..410 CDD:409353 1/3 (33%)
IG_like 426..505 CDD:214653 20/94 (21%)
Ig strand B 434..438 CDD:409353 0/3 (0%)
Ig strand C 448..452 CDD:409353 0/3 (0%)
Ig strand E 475..479 CDD:409353 0/3 (0%)
Ig strand F 489..494 CDD:409353 2/4 (50%)
FN3 513..606 CDD:238020 21/97 (22%)
fn3 642..712 CDD:394996 13/69 (19%)
Blue background indicates that the domain is not in the aligned region.

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