DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-theta and pigrl4.2

DIOPT Version :9

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001293038.1 Gene:pigrl4.2 / 105665605 ZFINID:ZDB-GENE-150409-10 Length:240 Species:Danio rerio


Alignment Length:131 Identity:29/131 - (22%)
Similarity:55/131 - (41%) Gaps:31/131 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 QNVTVPVSREAVLQCVVDNLQTYKI---------AWLRVDTQTILTIQNHVITKNHRMSIT-HAE 191
            :.:|:|        |:.||  .||:         .||..   :::...||    ..:.:|| :.:
Zfish    32 ETITIP--------CLYDN--KYKLNKKYWCNGNTWLGC---SVVAYANH----TGKWTITDYPD 79

  Fly   192 KRAWILRIRDVKESDKGWYMCQINTDPM--KSQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLK 254
            ...:.:.:.:...||.|.|.|.:..|..  .|:..||.|...||:  ...|:.:...:|.:|:::
Zfish    80 HNMFTVTLNNSTSSDSGHYWCAVEIDHHVDNSKYLYLTVQKAPDV--SVLSSSVSGHKGDDVSVR 142

  Fly   255 C 255
            |
Zfish   143 C 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 23/104 (22%)
IG_like 137..230 CDD:214653 23/104 (22%)
IG_like 240..324 CDD:214653 4/16 (25%)
IGc2 247..310 CDD:197706 3/9 (33%)
Ig 327..419 CDD:299845
IG_like 343..420 CDD:214653
pigrl4.2NP_001293038.1 IG_like 26..118 CDD:214653 22/102 (22%)
Ig_pIgR 30..117 CDD:143193 21/101 (21%)
Ig 133..217 CDD:299845 3/11 (27%)
IG_like 136..218 CDD:214653 3/8 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 40 1.000 Domainoid score I12510
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.