DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and lsamp

DIOPT Version :10

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_031751462.1 Gene:lsamp / 100124984 XenbaseID:XB-GENE-5759171 Length:368 Species:Xenopus tropicalis


Alignment Length:357 Identity:105/357 - (29%)
Similarity:159/357 - (44%) Gaps:68/357 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 FGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNHRMSITHAEKRA-- 194
            |.....|:||.....|:|:|.|:: ::.::|||  :...|:...:...:.:.|:.:   |||:  
 Frog    34 FNRSTDNITVRQGDTAILRCFVED-RSSRVAWL--NRSGIIFAGDDKWSLDPRVEL---EKRSLL 92

  Fly   195 -WILRIRDVKESDKGWYMCQINT-DPMKSQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLKCAA 257
             :.|||:.|..||:|.|.|.:.| ...|:...||.|.|||.|.:  .|.|:.:.|||||||.|.|
 Frog    93 EYSLRIQKVDVSDEGPYTCSVQTKQHTKTTQVYLIVQVPPKISN--ISADITVNEGSNVTLMCIA 155

  Fly   258 TGSPTPTITWRREGGELIPLPNGAEAVAYNG--SFLTIAKVNRLNMGAYLCIASNGIPPTVSKRV 320
            .|.|.|.||||    .|.|....:.|..:.|  .||.|..:.|...|.|.|.|:|.:.....|:|
 Frog   156 YGRPEPMITWR----HLTPTAGTSPARDFEGEEEFLEIQGITREQSGRYECKAANEVASADVKQV 216

  Fly   321 MLIVHFPPMIWIQNQLVGAALTQNITLECQSEAYPKSINYWMKNDT------------IIVPGER 373
            .:.|::||:| .:::...|...:...|.|::.|.|.....|.|:||            |...|.|
 Frog   217 RVTVNYPPII-TESKSNEATTGKQAILRCEASAVPAPDFEWYKDDTRSRRINSAQGLEIRNTGSR 280

  Fly   374 FVPETFESGYKITMRLTIYEVDIQDFGAYRCVAKNSLGDTDGAIKLYHIPQTTTMTTMAPTVSIN 438
            .|             |.:..|..:.:|.|.|||.|.||.|:.::.||        ..::||..::
 Frog   281 SV-------------LMVANVTEEHYGNYTCVAANKLGITNTSLYLY--------KRVSPTKPMS 324

  Fly   439 TVPVVLVKYNKEQRYGSSQNSNTN-PYNFNPG 469
                           .|.:.||.: .|...||
 Frog   325 ---------------ASERGSNVHYQYKVGPG 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 29/96 (30%)
Ig strand B 147..151 CDD:409353 2/3 (67%)
Ig strand C 160..164 CDD:409353 1/3 (33%)
Ig strand E 195..199 CDD:409353 1/3 (33%)
Ig strand F 209..214 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 0/2 (0%)
Ig 232..324 CDD:472250 35/93 (38%)
Ig strand B 251..255 CDD:409275 3/3 (100%)
Ig strand C 264..268 CDD:409275 2/3 (67%)
Ig strand E 289..293 CDD:409275 2/3 (67%)
Ig strand F 303..308 CDD:409275 2/4 (50%)
Ig strand G 317..320 CDD:409275 1/2 (50%)
Ig_3 327..408 CDD:464046 23/92 (25%)
lsampXP_031751462.1 Ig 38..128 CDD:472250 28/95 (29%)
Ig strand B 49..53 CDD:409353 2/3 (67%)
Ig strand C 61..65 CDD:409353 1/3 (33%)
Ig strand E 94..98 CDD:409353 1/3 (33%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 121..124 CDD:409353 0/2 (0%)
Ig_3 131..206 CDD:464046 33/80 (41%)
Ig_3 223..302 CDD:464046 23/92 (25%)

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