DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-theta and vsig10

DIOPT Version :10

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_073805710.1 Gene:vsig10 / 100005564 ZFINID:ZDB-GENE-030131-7476 Length:539 Species:Danio rerio


Alignment Length:482 Identity:85/482 - (17%)
Similarity:142/482 - (29%) Gaps:208/482 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TAAVVSIICLSLALPGCAAQESDDEGELHHLDQMHHQHQDFIIGESEEHDHIAHHLAEMQNKDEL 111
            |:|||..:.|                 |.|......|.|.|:|||...:..: |.|.:..|...:
Zfish     4 TSAVVLYLLL-----------------LSHQTVSEEQVQQFVIGEKGNNTTL-HCLDQPVNASSV 50

  Fly   112 LEDIREDTVVNAIPEKDLPKFGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQN 176
            |...::|..|.|......|       :|.:.:|...                             
Zfish    51 LYQWKKDGAVVATQNPPNP-------SVHLSISENG----------------------------- 79

  Fly   177 HVITKNHRMSITHAEKRAWILRIRDVKESDKGWYMCQINTDPMKS--QVGYLDVVV---PPDI-L 235
                               .|||..::..|:|.|.|:......:|  .:..:.:.:   |..: |
Zfish    80 -------------------FLRISGLQLIDEGLYECESQAKGGRSWQTLSKIQLTIAAGPTGVSL 125

  Fly   236 DYPTST-----DMVIREGSNVTLKCAATGSPTPTITWR----------REGGELIPLPNGAEAVA 285
            |...:|     .:.:.:||:|...|::..:|:..:||.          ||.|...||.       
Zfish   126 DISPATFLNNGTLFVHKGSDVNFSCSSESNPSQNLTWTVDNLASDNPGREFGSKSPLA------- 183

  Fly   286 YNGSFLTIAKVNRLNMGAYLCIASNGIP-PTVSKRVMLIVHF----------------------- 326
                 .:|..:..|:.|.|.|.:.|.:. .|.:|...|:|::                       
Zfish   184 -----FSITNIQPLDQGTYTCTSQNTLSRRTANKTQELLVYYAPERHPECSWELGDKPSDVLFIC 243

  Fly   327 --------PPMIWIQNQLVGAA------LT----------------------------------- 342
                    |.:.|  .::.|||      ||                                   
Zfish   244 SWFGGYPVPTLTW--QEVEGAAEGPTINLTTSQQTEELNVSVNRSILHDGDKVKCTGHHVTGVEK 306

  Fly   343 ----------------------QNITLEC-QSEAYPKSINYWMKNDTIIVPGERFVPETFESGYK 384
                                  .|||:.| ::.:.|.:...|.|||.:|....:::.:.....: 
Zfish   307 SCSFTLKIPYPTGQPLATALEGTNITISCTETSSLPPAKTVWKKNDDLIENTSKYIVQENRPAF- 370

  Fly   385 ITMRLTIYEVDIQDFGAYRCVAKNSLG 411
               .|||..|...|.|.|.|.::|.||
Zfish   371 ---TLTIVNVTKADEGVYYCYSENPLG 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 10/94 (11%)
Ig strand B 147..151 CDD:409353 0/3 (0%)
Ig strand C 160..164 CDD:409353 0/3 (0%)
Ig strand E 195..199 CDD:409353 1/3 (33%)
Ig strand F 209..214 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 1/4 (25%)
Ig 232..324 CDD:472250 24/108 (22%)
Ig strand B 251..255 CDD:409275 1/3 (33%)
Ig strand C 264..268 CDD:409275 1/3 (33%)
Ig strand E 289..293 CDD:409275 0/3 (0%)
Ig strand F 303..308 CDD:409275 2/4 (50%)
Ig strand G 317..320 CDD:409275 1/2 (50%)
Ig_3 327..408 CDD:464046 25/144 (17%)
vsig10XP_073805710.1 None

Return to query results.
Submit another query.