DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-theta and dscaml1

DIOPT Version :9

Sequence 1:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_005157551.1 Gene:dscaml1 / 100002762 -ID:- Length:2158 Species:Danio rerio


Alignment Length:657 Identity:138/657 - (21%)
Similarity:217/657 - (33%) Gaps:180/657 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TIAARRQRRRAAGKLQ----RKREMPEISSRLIVATATAAVVSIICLSLALPG------CAAQES 68
            |:.....::|.:|..|    ||.:..:..|.:::...|..:||.....:..||      |||:.:
Zfish   439 TLFITAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVSSFSERVVAPGEPFSLMCAAKGA 503

  Fly    69 ---------DDEGELHHLDQMHHQHQDFIIGESEEHDHIAHHLAEMQNKDELLEDIREDTVVNAI 124
                     |||....  |..|...| :.:.:.....|:     .:.|     ..||:..|....
Zfish   504 PPPTITWTLDDEPVAR--DSAHRASQ-YTLSDGSTVSHV-----NVTN-----PQIRDGGVYRCA 555

  Fly   125 PEKDL-------------PKFGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQN 176
            .....             |.....::|:|....|...:.|.|.....|.|.|.:         ..
Zfish   556 ARNSAGSAEYQARINVRGPPSIRAMRNITAVAGRNTFINCRVIGYPYYSIKWYK---------DG 611

  Fly   177 HVITKNHRMSITHAEKRAWILRIRDV-KESDKGWYMCQINTDPMK--SQVGYLDVVVPPDI--LD 236
            .::..|||..:    .....|::.|| |..|:|.|:|.:...|..  ||..|:.|.|||.|  .|
Zfish   612 MLLPDNHRQVV----YENGTLKLSDVQKGMDEGAYLCSVLIQPQLSISQTVYVTVKVPPLIQPFD 672

  Fly   237 YP--------------TSTDMVIR----------------------------------------- 246
            :|              :|.||.||                                         
Zfish   673 FPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVSGTAGVTIETKEFMSSLQISKVSLKHNGNY 737

  Fly   247 -----------------------------------EGSNVTLKCAATGSPTPTITWRREGG---- 272
                                               .|.:..|.|:..|.|.|.:.|:...|    
Zfish   738 TCIASNDAATVSSERQLIVTVPPRFRVQPNNQDGIYGKSEVLNCSVEGYPPPKVVWKHAKGIGNP 802

  Fly   273 -ELIPLP-NGAEAVAYNGSFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVMLIVHFPPMIWIQNQ 335
             :..|:| .|...:..|||.| |..|...:.|.|||.||||:...:||.:||.|..|.||.....
Zfish   803 QQYHPVPLTGRIQILSNGSLL-IRHVLEEDRGYYLCQASNGVGSDISKSMMLTVKIPAMITSHPN 866

  Fly   336 LVGAALTQNITLECQSEA-YPKSINYWMKNDTIIVP--GERFVPETF--ESGYKITMRLTIYEVD 395
            ...|...||..|.|.:.. ||..|. |.:.||:|.|  ..|:...|.  |...::...|.:...:
Zfish   867 TTMAIKGQNKELNCTARGEYPIIIR-WERGDTVIDPDRNPRYSITTSPNEKSDEVISTLKLKPAE 930

  Fly   396 IQDFGAYRCVAKNSLGDTDGAIKLYHIPQTTTMTTMAPTVSINTVPVVLVKYNKEQRYGSSQNSN 460
            ..|...:.|.|.||.|:..|.|:|     |.......|.:.:..|....:.....||:..  ||.
Zfish   931 RGDSVFFSCHAINSYGEGRGLIQL-----TVQEPPDPPELEVREVKDRSMNLRWTQRFDG--NSI 988

  Fly   461 TNPYNFNPGNSQQNTKLQR-----GKSNSKGS--DQSPSGLNNVFVGATSSLWNSQDHHSSSSSS 518
            ...|:....|.....:|:.     ..:|::.:  :..|:.:.::.:.:.:.:..||.....:.|:
Zfish   989 ITSYDIEYKNKSDPWELKHATRKISPTNNQANIVELHPASVYSIRMYSYNKIGRSQASKELTIST 1053

  Fly   519 SSASSRG 525
            ..|...|
Zfish  1054 EEAPPDG 1060

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 24/95 (25%)
IG_like 137..230 CDD:214653 24/95 (25%)
IG_like 240..324 CDD:214653 34/165 (21%)
IGc2 247..310 CDD:197706 22/68 (32%)
Ig 327..419 CDD:299845 28/96 (29%)
IG_like 343..420 CDD:214653 24/81 (30%)
dscaml1XP_005157551.1 IG_like 112..184 CDD:214653
Ig 112..183 CDD:143165
Ig 194..287 CDD:299845
I-set 302..380 CDD:254352
IGc2 309..370 CDD:197706
IGc2 399..458 CDD:197706 4/18 (22%)
I-set 477..571 CDD:254352 18/106 (17%)
Ig 477..567 CDD:299845 18/102 (18%)
IG_like 581..662 CDD:214653 23/93 (25%)
IGc2 588..646 CDD:197706 17/70 (24%)
Ig 684..751 CDD:143165 5/66 (8%)
IG_like 686..756 CDD:214653 5/69 (7%)
I-set 760..855 CDD:254352 29/95 (31%)
Ig7_DSCAM 778..855 CDD:143211 28/77 (36%)
IG_like 865..956 CDD:214653 26/96 (27%)
Ig 873..963 CDD:299845 26/95 (27%)
FN3 959..1053 CDD:238020 13/95 (14%)
FN3 1060..1157 CDD:238020 1/1 (100%)
FN3 1165..1271 CDD:238020
FN3 1276..1367 CDD:238020
IGc2 1392..1455 CDD:197706
FN3 1486..1559 CDD:238020
FN3 1573..1649 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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