DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-eta and zgc:152904

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001070212.1 Gene:zgc:152904 / 767777 ZFINID:ZDB-GENE-060929-856 Length:809 Species:Danio rerio


Alignment Length:451 Identity:101/451 - (22%)
Similarity:163/451 - (36%) Gaps:95/451 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EVPAEVIVDPKFSSP--IVNMTAPVGRDAFLTCVVQDLGPYKVAWLRVDTQTILTIQNHVITKNQ 96
            ::..:|.|.|..|.|  ..|.||........|||.......:|.|.         .:.|.|..::
Zfish   169 DIVVQVNVPPVLSVPQQSFNATADYQESVTFTCVTSGSPDPQVTWY---------WKGHAIEHSE 224

  Fly    97 RIGIANSEHKTWTMRIKDIKESDKGWYMCQIN--TDPMKSQMGYLDVVVPPDILDYPTSTDMVVR 159
            :..:........|:.:|:||::|.|.|||:.:  ....:||: :|.|.|.|.|......|.:   
Zfish   225 QYVLNTMNGGKSTLTVKNIKQTDGGPYMCRASNKAGSSESQL-FLKVFVQPHITQLRNVTAV--- 285

  Fly   160 EGSNVTLKCAATGSPEPTITWRRESG--------------VPIELATGEEVMSIEGTDLVIPNVR 210
            |||...:.|.|.|.|.|.|:|||.|.              |.:....|:.:::|.|..|      
Zfish   286 EGSAAMISCTAEGEPLPEISWRRASDGHSFTDGEKSKDGRVEVRGRHGKSMLTISGVQL------ 344

  Fly   211 RHHMGAYLCIASNGVPPSVSKRITLVVHFPPMITVQNQLIGAVEGKGVTLDCESEAYPKSINYWT 275
             ...|.:.|.|.:.: ....|.:.|.:.:.|.......:..:.||..|.:.||.::.|.:...|.
Zfish   345 -SDWGRFDCEALSRI-GGHQKSMFLDIEYAPKFQTNQSIFYSWEGNPVNISCEVKSNPAATMLWR 407

  Fly   276 RERGEIVPPGGKYSANVTEIGGYRNSMRLHINPLTQAEFGSYRCVAKNSLG---------DTDGT 331
            |||..|...|   ::|: .|........|.:.|::..:||.|.|.|:|::|         ..|..
Zfish   408 RERFTISSQG---TSNI-RIHSTDGRSLLEVTPVSDRDFGRYNCTARNNIGARYQEFILAQADVP 468

  Fly   332 IKLYRIPPNAVN---------------------YVENF----------EARHKGKKRTKSSESHH 365
            ...|.:...||:                     |:.|:          .||..|.:......|..
Zfish   469 SSPYSVRMTAVSQRMATVSFMKPDSHGGVPISFYIINYRDTSSAQEWRSARTHGVQTAVVLTSLE 533

  Fly   366 PARAQEHSGEDMENPGKRK-------ADLSLGAESIDSIYGNSAAGSRRR-----QDLGGV 414
            |....|.....:...|:.:       ..|.:...|..:::|....|...|     ||.||:
Zfish   534 PNTTYEVRVSAVNGKGQGEFSHTESFQTLPIREPSPPTVHGQRGVGKAYRLGLVKQDDGGM 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 22/91 (24%)
IG_like 51..137 CDD:214653 21/87 (24%)
IG_like 153..237 CDD:214653 24/97 (25%)
Ig 161..224 CDD:299845 20/76 (26%)
IG_like 252..335 CDD:214653 24/91 (26%)
Ig 258..333 CDD:143165 22/83 (27%)
zgc:152904NP_001070212.1 Ig 1..81 CDD:299845
IG_like 2..80 CDD:214653
IGc2 97..158 CDD:197706
Ig 177..273 CDD:299845 26/105 (25%)
I-set 184..270 CDD:254352 22/95 (23%)
Ig 272..369 CDD:299845 27/107 (25%)
I-set 274..367 CDD:254352 25/103 (24%)
IG_like 385..462 CDD:214653 23/80 (29%)
IGc2 386..454 CDD:197706 22/71 (31%)
FN3 468..561 CDD:238020 12/92 (13%)
fn3 <591..650 CDD:278470 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.